Gene : AT1G06720 A. thaliana TAIR10
Defline:  (1 of 1) K14569 - ribosome biogenesis protein BMS1 (BMS1) Genomic Order:  606
Name:  ? AT1G06720 Secondary Identifier:  ? PAC:19653601
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G06720 0.5kb upstream 0.5kb upstream 7380 true Chr1: 2060444-2067823 Arabidopsis thaliana
AT1G06720 0.5kb upstream 0.5kb upstream 500 false Chr1: 2067324-2067823 Arabidopsis thaliana
AT1G06720 0.5kb downstream 0.5kb downstream 7380 true Chr1: 2059944-2067323 Arabidopsis thaliana
AT1G06720 0.5kb downstream 0.5kb downstream 500 false Chr1: 2059944-2060443 Arabidopsis thaliana
AT1G06720 1.0kb upstream 1.0kb upstream 7880 true Chr1: 2060444-2068323 Arabidopsis thaliana
AT1G06720 1.0kb upstream 1.0kb upstream 1000 false Chr1: 2067324-2068323 Arabidopsis thaliana
AT1G06720 1.0kb downstream 1.0kb downstream 7880 true Chr1: 2059444-2067323 Arabidopsis thaliana
AT1G06720 1.0kb downstream 1.0kb downstream 1000 false Chr1: 2059444-2060443 Arabidopsis thaliana
AT1G06720 2.0kb upstream 2.0kb upstream 8880 true Chr1: 2060444-2069323 Arabidopsis thaliana
AT1G06720 2.0kb upstream 2.0kb upstream 2000 false Chr1: 2067324-2069323 Arabidopsis thaliana
AT1G06720 2.0kb downstream 2.0kb downstream 8880 true Chr1: 2058444-2067323 Arabidopsis thaliana
AT1G06720 2.0kb downstream 2.0kb downstream 2000 false Chr1: 2058444-2060443 Arabidopsis thaliana
AT1G06720 5.0kb upstream 5.0kb upstream 11880 true Chr1: 2060444-2072323 Arabidopsis thaliana
AT1G06720 5.0kb upstream 5.0kb upstream 5000 false Chr1: 2067324-2072323 Arabidopsis thaliana
AT1G06720 5.0kb downstream 5.0kb downstream 11880 true Chr1: 2055444-2067323 Arabidopsis thaliana
AT1G06720 5.0kb downstream 5.0kb downstream 5000 false Chr1: 2055444-2060443 Arabidopsis thaliana
AT1G06720 10.0kb upstream 10.0kb upstream 16880 true Chr1: 2060444-2077323 Arabidopsis thaliana
AT1G06720 10.0kb upstream 10.0kb upstream 10000 false Chr1: 2067324-2077323 Arabidopsis thaliana
AT1G06720 10.0kb downstream 10.0kb downstream 16880 true Chr1: 2050444-2067323 Arabidopsis thaliana
AT1G06720 10.0kb downstream 10.0kb downstream 10000 false Chr1: 2050444-2060443 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374557 5261 Brassicaceae View MSA
123830730 5264 Brassicales-Malvales View MSA
124344337 5266 SBM View MSA
124247347 5268 Malvidae View MSA
124068054 5270 Rosid View MSA
123746170 5271 Pentapetalae View MSA
122788558 5272 Eudicot View MSA
122050261 5273 Angiosperm View MSA
121345125 5274 Embryophyte View MSA
123424272 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.432        
cufflinks 11.786        
cufflinks 6.644        
cufflinks 13.23        
cufflinks 5.289       Low
cufflinks 12.875        

0 Strain