Gene : FTSH8 A. thaliana TAIR10
Primary Identifier:  ? AT1G06430 Defline:  (1 of 2) PTHR23076//PTHR23076:SF60 - METALLOPROTEASE M41 FTSH // SUBFAMILY NOT NAMED
Genomic Order:  577 Name:  ? AT1G06430
Secondary Identifier:  ? PAC:19651841
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G06430 0.5kb upstream 0.5kb upstream 3454 true Chr1: 1960058-1963511 Arabidopsis thaliana
AT1G06430 0.5kb upstream 0.5kb upstream 500 false Chr1: 1963012-1963511 Arabidopsis thaliana
AT1G06430 0.5kb downstream 0.5kb downstream 3454 true Chr1: 1959558-1963011 Arabidopsis thaliana
AT1G06430 0.5kb downstream 0.5kb downstream 500 false Chr1: 1959558-1960057 Arabidopsis thaliana
AT1G06430 1.0kb upstream 1.0kb upstream 3954 true Chr1: 1960058-1964011 Arabidopsis thaliana
AT1G06430 1.0kb upstream 1.0kb upstream 1000 false Chr1: 1963012-1964011 Arabidopsis thaliana
AT1G06430 1.0kb downstream 1.0kb downstream 3954 true Chr1: 1959058-1963011 Arabidopsis thaliana
AT1G06430 1.0kb downstream 1.0kb downstream 1000 false Chr1: 1959058-1960057 Arabidopsis thaliana
AT1G06430 2.0kb upstream 2.0kb upstream 4954 true Chr1: 1960058-1965011 Arabidopsis thaliana
AT1G06430 2.0kb upstream 2.0kb upstream 2000 false Chr1: 1963012-1965011 Arabidopsis thaliana
AT1G06430 2.0kb downstream 2.0kb downstream 4954 true Chr1: 1958058-1963011 Arabidopsis thaliana
AT1G06430 2.0kb downstream 2.0kb downstream 2000 false Chr1: 1958058-1960057 Arabidopsis thaliana
AT1G06430 5.0kb upstream 5.0kb upstream 7954 true Chr1: 1960058-1968011 Arabidopsis thaliana
AT1G06430 5.0kb upstream 5.0kb upstream 5000 false Chr1: 1963012-1968011 Arabidopsis thaliana
AT1G06430 5.0kb downstream 5.0kb downstream 7954 true Chr1: 1955058-1963011 Arabidopsis thaliana
AT1G06430 5.0kb downstream 5.0kb downstream 5000 false Chr1: 1955058-1960057 Arabidopsis thaliana
AT1G06430 10.0kb upstream 10.0kb upstream 12954 true Chr1: 1960058-1973011 Arabidopsis thaliana
AT1G06430 10.0kb upstream 10.0kb upstream 10000 false Chr1: 1963012-1973011 Arabidopsis thaliana
AT1G06430 10.0kb downstream 10.0kb downstream 12954 true Chr1: 1950058-1963011 Arabidopsis thaliana
AT1G06430 10.0kb downstream 10.0kb downstream 10000 false Chr1: 1950058-1960057 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362450 5261 Brassicaceae View MSA
123839956 5264 Brassicales-Malvales View MSA
124341395 5266 SBM View MSA
124239029 5268 Malvidae View MSA
124067047 5270 Rosid View MSA
123736542 5271 Pentapetalae View MSA
122790199 5272 Eudicot View MSA
122046550 5273 Angiosperm View MSA
121351325 5274 Embryophyte View MSA
123426403 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 40.213     High  
cufflinks 4.194        
cufflinks 45.488     High  
cufflinks 6.149        
cufflinks 71.409     High High
cufflinks 2.813       Low

0 Strain