Gene : ORA59 A. thaliana TAIR10
Primary Identifier:  ? AT1G06160 Defline:  (1 of 141) PF00847 - AP2 domain (AP2)
Genomic Order:  551 Name:  ? AT1G06160
Secondary Identifier:  ? PAC:19658291
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G06160 0.5kb upstream 0.5kb upstream 1431 true Chr1: 1882504-1883934 Arabidopsis thaliana
AT1G06160 0.5kb upstream 0.5kb upstream 500 false Chr1: 1882504-1883003 Arabidopsis thaliana
AT1G06160 0.5kb downstream 0.5kb downstream 1431 true Chr1: 1883004-1884434 Arabidopsis thaliana
AT1G06160 0.5kb downstream 0.5kb downstream 500 false Chr1: 1883935-1884434 Arabidopsis thaliana
AT1G06160 1.0kb upstream 1.0kb upstream 1931 true Chr1: 1882004-1883934 Arabidopsis thaliana
AT1G06160 1.0kb upstream 1.0kb upstream 1000 false Chr1: 1882004-1883003 Arabidopsis thaliana
AT1G06160 1.0kb downstream 1.0kb downstream 1931 true Chr1: 1883004-1884934 Arabidopsis thaliana
AT1G06160 1.0kb downstream 1.0kb downstream 1000 false Chr1: 1883935-1884934 Arabidopsis thaliana
AT1G06160 2.0kb upstream 2.0kb upstream 2931 true Chr1: 1881004-1883934 Arabidopsis thaliana
AT1G06160 2.0kb upstream 2.0kb upstream 2000 false Chr1: 1881004-1883003 Arabidopsis thaliana
AT1G06160 2.0kb downstream 2.0kb downstream 2931 true Chr1: 1883004-1885934 Arabidopsis thaliana
AT1G06160 2.0kb downstream 2.0kb downstream 2000 false Chr1: 1883935-1885934 Arabidopsis thaliana
AT1G06160 5.0kb upstream 5.0kb upstream 5931 true Chr1: 1878004-1883934 Arabidopsis thaliana
AT1G06160 5.0kb upstream 5.0kb upstream 5000 false Chr1: 1878004-1883003 Arabidopsis thaliana
AT1G06160 5.0kb downstream 5.0kb downstream 5931 true Chr1: 1883004-1888934 Arabidopsis thaliana
AT1G06160 5.0kb downstream 5.0kb downstream 5000 false Chr1: 1883935-1888934 Arabidopsis thaliana
AT1G06160 10.0kb upstream 10.0kb upstream 10931 true Chr1: 1873004-1883934 Arabidopsis thaliana
AT1G06160 10.0kb upstream 10.0kb upstream 10000 false Chr1: 1873004-1883003 Arabidopsis thaliana
AT1G06160 10.0kb downstream 10.0kb downstream 10931 true Chr1: 1883004-1893934 Arabidopsis thaliana
AT1G06160 10.0kb downstream 10.0kb downstream 10000 false Chr1: 1883935-1893934 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376193 5261 Brassicaceae View MSA
123801173 5264 Brassicales-Malvales View MSA
124298507 5266 SBM View MSA
124250271 5268 Malvidae View MSA
124074692 5270 Rosid View MSA
123751069 5271 Pentapetalae View MSA
122793913 5272 Eudicot View MSA
122046946 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.6        
cufflinks 9.685        
cufflinks 5.906        
cufflinks 10.881        
cufflinks 11.81        
cufflinks 2.058       Low

0 Strain