Gene : TAF11b A. thaliana TAIR10
Primary Identifier:  ? AT1G20000 Defline:  (1 of 2) K03135 - transcription initiation factor TFIID subunit 11 (TAF11)
Genomic Order:  2012 Name:  ? AT1G20000
Secondary Identifier:  ? PAC:19657608
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G20000 0.5kb upstream 0.5kb upstream 1269 true Chr1: 6936898-6938166 Arabidopsis thaliana
AT1G20000 0.5kb upstream 0.5kb upstream 500 false Chr1: 6937667-6938166 Arabidopsis thaliana
AT1G20000 0.5kb downstream 0.5kb downstream 1269 true Chr1: 6936398-6937666 Arabidopsis thaliana
AT1G20000 0.5kb downstream 0.5kb downstream 500 false Chr1: 6936398-6936897 Arabidopsis thaliana
AT1G20000 1.0kb upstream 1.0kb upstream 1769 true Chr1: 6936898-6938666 Arabidopsis thaliana
AT1G20000 1.0kb upstream 1.0kb upstream 1000 false Chr1: 6937667-6938666 Arabidopsis thaliana
AT1G20000 1.0kb downstream 1.0kb downstream 1769 true Chr1: 6935898-6937666 Arabidopsis thaliana
AT1G20000 1.0kb downstream 1.0kb downstream 1000 false Chr1: 6935898-6936897 Arabidopsis thaliana
AT1G20000 2.0kb upstream 2.0kb upstream 2769 true Chr1: 6936898-6939666 Arabidopsis thaliana
AT1G20000 2.0kb upstream 2.0kb upstream 2000 false Chr1: 6937667-6939666 Arabidopsis thaliana
AT1G20000 2.0kb downstream 2.0kb downstream 2769 true Chr1: 6934898-6937666 Arabidopsis thaliana
AT1G20000 2.0kb downstream 2.0kb downstream 2000 false Chr1: 6934898-6936897 Arabidopsis thaliana
AT1G20000 5.0kb upstream 5.0kb upstream 5769 true Chr1: 6936898-6942666 Arabidopsis thaliana
AT1G20000 5.0kb upstream 5.0kb upstream 5000 false Chr1: 6937667-6942666 Arabidopsis thaliana
AT1G20000 5.0kb downstream 5.0kb downstream 5769 true Chr1: 6931898-6937666 Arabidopsis thaliana
AT1G20000 5.0kb downstream 5.0kb downstream 5000 false Chr1: 6931898-6936897 Arabidopsis thaliana
AT1G20000 10.0kb upstream 10.0kb upstream 10769 true Chr1: 6936898-6947666 Arabidopsis thaliana
AT1G20000 10.0kb upstream 10.0kb upstream 10000 false Chr1: 6937667-6947666 Arabidopsis thaliana
AT1G20000 10.0kb downstream 10.0kb downstream 10769 true Chr1: 6926898-6937666 Arabidopsis thaliana
AT1G20000 10.0kb downstream 10.0kb downstream 10000 false Chr1: 6926898-6936897 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121493614 5273 Angiosperm Singleton cluster - no MSA
122329035 5261 Brassicaceae Singleton cluster - no MSA
123770353 5264 Brassicales-Malvales Singleton cluster - no MSA
124268895 5266 SBM Singleton cluster - no MSA
124125065 5268 Malvidae Singleton cluster - no MSA
123854057 5270 Rosid Singleton cluster - no MSA
123440088 5271 Pentapetalae Singleton cluster - no MSA
122475678 5272 Eudicot Singleton cluster - no MSA
120766988 5274 Embryophyte Singleton cluster - no MSA
122809386 5275 Viridiplantae Singleton cluster - no MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.02     Low  

0 Strain