Gene : AT1G06120 A. thaliana TAIR10
Defline:  (1 of 9) PTHR11351//PTHR11351:SF2 - ACYL-COA DESATURASE // DELTA-9 ACYL-LIPID DESATURASE 1-RELATED Genomic Order:  543
Name:  ? AT1G06120 Secondary Identifier:  ? PAC:19658049
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G06120 0.5kb upstream 0.5kb upstream 2276 true Chr1: 1855443-1857718 Arabidopsis thaliana
AT1G06120 0.5kb upstream 0.5kb upstream 500 false Chr1: 1855443-1855942 Arabidopsis thaliana
AT1G06120 0.5kb downstream 0.5kb downstream 2276 true Chr1: 1855943-1858218 Arabidopsis thaliana
AT1G06120 0.5kb downstream 0.5kb downstream 500 false Chr1: 1857719-1858218 Arabidopsis thaliana
AT1G06120 1.0kb upstream 1.0kb upstream 2776 true Chr1: 1854943-1857718 Arabidopsis thaliana
AT1G06120 1.0kb upstream 1.0kb upstream 1000 false Chr1: 1854943-1855942 Arabidopsis thaliana
AT1G06120 1.0kb downstream 1.0kb downstream 2776 true Chr1: 1855943-1858718 Arabidopsis thaliana
AT1G06120 1.0kb downstream 1.0kb downstream 1000 false Chr1: 1857719-1858718 Arabidopsis thaliana
AT1G06120 2.0kb upstream 2.0kb upstream 3776 true Chr1: 1853943-1857718 Arabidopsis thaliana
AT1G06120 2.0kb upstream 2.0kb upstream 2000 false Chr1: 1853943-1855942 Arabidopsis thaliana
AT1G06120 2.0kb downstream 2.0kb downstream 3776 true Chr1: 1855943-1859718 Arabidopsis thaliana
AT1G06120 2.0kb downstream 2.0kb downstream 2000 false Chr1: 1857719-1859718 Arabidopsis thaliana
AT1G06120 5.0kb upstream 5.0kb upstream 6776 true Chr1: 1850943-1857718 Arabidopsis thaliana
AT1G06120 5.0kb upstream 5.0kb upstream 5000 false Chr1: 1850943-1855942 Arabidopsis thaliana
AT1G06120 5.0kb downstream 5.0kb downstream 6776 true Chr1: 1855943-1862718 Arabidopsis thaliana
AT1G06120 5.0kb downstream 5.0kb downstream 5000 false Chr1: 1857719-1862718 Arabidopsis thaliana
AT1G06120 10.0kb upstream 10.0kb upstream 11776 true Chr1: 1845943-1857718 Arabidopsis thaliana
AT1G06120 10.0kb upstream 10.0kb upstream 10000 false Chr1: 1845943-1855942 Arabidopsis thaliana
AT1G06120 10.0kb downstream 10.0kb downstream 11776 true Chr1: 1855943-1867718 Arabidopsis thaliana
AT1G06120 10.0kb downstream 10.0kb downstream 10000 false Chr1: 1857719-1867718 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121493638 5273 Angiosperm Singleton cluster - no MSA
122329066 5261 Brassicaceae Singleton cluster - no MSA
123770382 5264 Brassicales-Malvales Singleton cluster - no MSA
124268923 5266 SBM Singleton cluster - no MSA
124125092 5268 Malvidae Singleton cluster - no MSA
123854083 5270 Rosid Singleton cluster - no MSA
123440113 5271 Pentapetalae Singleton cluster - no MSA
122475703 5272 Eudicot Singleton cluster - no MSA
120767012 5274 Embryophyte Singleton cluster - no MSA
122809410 5275 Viridiplantae Singleton cluster - no MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.075     Low  
cufflinks 0.222     Low  
cufflinks 0.043     Low  
cufflinks 0.42        
cufflinks 0.015     Low Low
cufflinks 1.19       High

0 Strain