Gene : NTH2 A. thaliana TAIR10
Primary Identifier:  ? AT1G05900 Defline:  (1 of 3) K10773 - endonuclease III (NTH)
Genomic Order:  521 Name:  ? AT1G05900
Secondary Identifier:  ? PAC:19650069
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G05900 0.5kb upstream 0.5kb upstream 3321 true Chr1: 1786356-1789676 Arabidopsis thaliana
AT1G05900 0.5kb upstream 0.5kb upstream 500 false Chr1: 1786356-1786855 Arabidopsis thaliana
AT1G05900 0.5kb downstream 0.5kb downstream 3321 true Chr1: 1786856-1790176 Arabidopsis thaliana
AT1G05900 0.5kb downstream 0.5kb downstream 500 false Chr1: 1789677-1790176 Arabidopsis thaliana
AT1G05900 1.0kb upstream 1.0kb upstream 3821 true Chr1: 1785856-1789676 Arabidopsis thaliana
AT1G05900 1.0kb upstream 1.0kb upstream 1000 false Chr1: 1785856-1786855 Arabidopsis thaliana
AT1G05900 1.0kb downstream 1.0kb downstream 3821 true Chr1: 1786856-1790676 Arabidopsis thaliana
AT1G05900 1.0kb downstream 1.0kb downstream 1000 false Chr1: 1789677-1790676 Arabidopsis thaliana
AT1G05900 2.0kb upstream 2.0kb upstream 4821 true Chr1: 1784856-1789676 Arabidopsis thaliana
AT1G05900 2.0kb upstream 2.0kb upstream 2000 false Chr1: 1784856-1786855 Arabidopsis thaliana
AT1G05900 2.0kb downstream 2.0kb downstream 4821 true Chr1: 1786856-1791676 Arabidopsis thaliana
AT1G05900 2.0kb downstream 2.0kb downstream 2000 false Chr1: 1789677-1791676 Arabidopsis thaliana
AT1G05900 5.0kb upstream 5.0kb upstream 7821 true Chr1: 1781856-1789676 Arabidopsis thaliana
AT1G05900 5.0kb upstream 5.0kb upstream 5000 false Chr1: 1781856-1786855 Arabidopsis thaliana
AT1G05900 5.0kb downstream 5.0kb downstream 7821 true Chr1: 1786856-1794676 Arabidopsis thaliana
AT1G05900 5.0kb downstream 5.0kb downstream 5000 false Chr1: 1789677-1794676 Arabidopsis thaliana
AT1G05900 10.0kb upstream 10.0kb upstream 12821 true Chr1: 1776856-1789676 Arabidopsis thaliana
AT1G05900 10.0kb upstream 10.0kb upstream 10000 false Chr1: 1776856-1786855 Arabidopsis thaliana
AT1G05900 10.0kb downstream 10.0kb downstream 12821 true Chr1: 1786856-1799676 Arabidopsis thaliana
AT1G05900 10.0kb downstream 10.0kb downstream 10000 false Chr1: 1789677-1799676 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041361 5273 Angiosperm View MSA
122375325 5261 Brassicaceae View MSA
123838368 5264 Brassicales-Malvales View MSA
124343540 5266 SBM View MSA
124238853 5268 Malvidae View MSA
124060814 5270 Rosid View MSA
123745543 5271 Pentapetalae View MSA
122791789 5272 Eudicot View MSA
121344873 5274 Embryophyte View MSA
123425670 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.384        
cufflinks 1.958        
cufflinks 2.518       High
cufflinks 1.915        
cufflinks 2.295        
cufflinks 1.82       Low

0 Strain