Gene : ATX2 A. thaliana TAIR10
Primary Identifier:  ? AT1G05830 Defline:  (1 of 2) PTHR13793:SF100 - HISTONE-LYSINE N-METHYLTRANSFERASE ATX1-RELATED
Genomic Order:  512 Name:  ? AT1G05830
Secondary Identifier:  ? PAC:19654494
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G05830 0.5kb upstream 0.5kb upstream 8074 true Chr1: 1753744-1761817 Arabidopsis thaliana
AT1G05830 0.5kb upstream 0.5kb upstream 500 false Chr1: 1753744-1754243 Arabidopsis thaliana
AT1G05830 0.5kb downstream 0.5kb downstream 8074 true Chr1: 1754244-1762317 Arabidopsis thaliana
AT1G05830 0.5kb downstream 0.5kb downstream 500 false Chr1: 1761818-1762317 Arabidopsis thaliana
AT1G05830 1.0kb upstream 1.0kb upstream 8574 true Chr1: 1753244-1761817 Arabidopsis thaliana
AT1G05830 1.0kb upstream 1.0kb upstream 1000 false Chr1: 1753244-1754243 Arabidopsis thaliana
AT1G05830 1.0kb downstream 1.0kb downstream 8574 true Chr1: 1754244-1762817 Arabidopsis thaliana
AT1G05830 1.0kb downstream 1.0kb downstream 1000 false Chr1: 1761818-1762817 Arabidopsis thaliana
AT1G05830 2.0kb upstream 2.0kb upstream 9574 true Chr1: 1752244-1761817 Arabidopsis thaliana
AT1G05830 2.0kb upstream 2.0kb upstream 2000 false Chr1: 1752244-1754243 Arabidopsis thaliana
AT1G05830 2.0kb downstream 2.0kb downstream 9574 true Chr1: 1754244-1763817 Arabidopsis thaliana
AT1G05830 2.0kb downstream 2.0kb downstream 2000 false Chr1: 1761818-1763817 Arabidopsis thaliana
AT1G05830 5.0kb upstream 5.0kb upstream 12574 true Chr1: 1749244-1761817 Arabidopsis thaliana
AT1G05830 5.0kb upstream 5.0kb upstream 5000 false Chr1: 1749244-1754243 Arabidopsis thaliana
AT1G05830 5.0kb downstream 5.0kb downstream 12574 true Chr1: 1754244-1766817 Arabidopsis thaliana
AT1G05830 5.0kb downstream 5.0kb downstream 5000 false Chr1: 1761818-1766817 Arabidopsis thaliana
AT1G05830 10.0kb upstream 10.0kb upstream 17574 true Chr1: 1744244-1761817 Arabidopsis thaliana
AT1G05830 10.0kb upstream 10.0kb upstream 10000 false Chr1: 1744244-1754243 Arabidopsis thaliana
AT1G05830 10.0kb downstream 10.0kb downstream 17574 true Chr1: 1754244-1771817 Arabidopsis thaliana
AT1G05830 10.0kb downstream 10.0kb downstream 10000 false Chr1: 1761818-1771817 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371062 5261 Brassicaceae View MSA
123834361 5264 Brassicales-Malvales View MSA
124340150 5266 SBM View MSA
124240219 5268 Malvidae View MSA
124064853 5270 Rosid View MSA
123751890 5271 Pentapetalae View MSA
122797093 5272 Eudicot View MSA
122046345 5273 Angiosperm View MSA
121351412 5274 Embryophyte View MSA
123427373 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.641       Low
cufflinks 5.664       High
cufflinks 3.186        
cufflinks 5.504       High
cufflinks 2.972        
cufflinks 4.175        

0 Strain