Gene : OFP12 A. thaliana TAIR10
Primary Identifier:  ? AT1G05420 Defline:  (1 of 3) PTHR33057//PTHR33057:SF21 - FAMILY NOT NAMED // OVATE FAMILY PROTEIN 11-RELATED
Genomic Order:  466 Name:  ? AT1G05420
Secondary Identifier:  ? PAC:19656334
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G05420 0.5kb upstream 0.5kb upstream 1181 true Chr1: 1589573-1590753 Arabidopsis thaliana
AT1G05420 0.5kb upstream 0.5kb upstream 500 false Chr1: 1589573-1590072 Arabidopsis thaliana
AT1G05420 0.5kb downstream 0.5kb downstream 1181 true Chr1: 1590073-1591253 Arabidopsis thaliana
AT1G05420 0.5kb downstream 0.5kb downstream 500 false Chr1: 1590754-1591253 Arabidopsis thaliana
AT1G05420 1.0kb upstream 1.0kb upstream 1681 true Chr1: 1589073-1590753 Arabidopsis thaliana
AT1G05420 1.0kb upstream 1.0kb upstream 1000 false Chr1: 1589073-1590072 Arabidopsis thaliana
AT1G05420 1.0kb downstream 1.0kb downstream 1681 true Chr1: 1590073-1591753 Arabidopsis thaliana
AT1G05420 1.0kb downstream 1.0kb downstream 1000 false Chr1: 1590754-1591753 Arabidopsis thaliana
AT1G05420 2.0kb upstream 2.0kb upstream 2681 true Chr1: 1588073-1590753 Arabidopsis thaliana
AT1G05420 2.0kb upstream 2.0kb upstream 2000 false Chr1: 1588073-1590072 Arabidopsis thaliana
AT1G05420 2.0kb downstream 2.0kb downstream 2681 true Chr1: 1590073-1592753 Arabidopsis thaliana
AT1G05420 2.0kb downstream 2.0kb downstream 2000 false Chr1: 1590754-1592753 Arabidopsis thaliana
AT1G05420 5.0kb upstream 5.0kb upstream 5681 true Chr1: 1585073-1590753 Arabidopsis thaliana
AT1G05420 5.0kb upstream 5.0kb upstream 5000 false Chr1: 1585073-1590072 Arabidopsis thaliana
AT1G05420 5.0kb downstream 5.0kb downstream 5681 true Chr1: 1590073-1595753 Arabidopsis thaliana
AT1G05420 5.0kb downstream 5.0kb downstream 5000 false Chr1: 1590754-1595753 Arabidopsis thaliana
AT1G05420 10.0kb upstream 10.0kb upstream 10681 true Chr1: 1580073-1590753 Arabidopsis thaliana
AT1G05420 10.0kb upstream 10.0kb upstream 10000 false Chr1: 1580073-1590072 Arabidopsis thaliana
AT1G05420 10.0kb downstream 10.0kb downstream 10681 true Chr1: 1590073-1600753 Arabidopsis thaliana
AT1G05420 10.0kb downstream 10.0kb downstream 10000 false Chr1: 1590754-1600753 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362852 5261 Brassicaceae View MSA
123840944 5264 Brassicales-Malvales View MSA
124344929 5266 SBM View MSA
124253582 5268 Malvidae View MSA
124065353 5270 Rosid View MSA
123736628 5271 Pentapetalae View MSA
122795583 5272 Eudicot View MSA
122050214 5273 Angiosperm View MSA
121311801 5274 Embryophyte View MSA
123349046 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.659        
cufflinks 0.381        
cufflinks 0.489        
cufflinks 1.104       High
cufflinks 0.419        
cufflinks 0.467        

0 Strain