Gene : emb2394 A. thaliana TAIR10
Primary Identifier:  ? AT1G05190 Defline:  (1 of 1) PTHR11655//PTHR11655:SF14 - 60S/50S RIBOSOMAL PROTEIN L6/L9 // 54S RIBOSOMAL PROTEIN L6, MITOCHONDRIAL
Genomic Order:  441 Name:  ? AT1G05190
Secondary Identifier:  ? PAC:19651708
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G05190 0.5kb upstream 0.5kb upstream 1987 true Chr1: 1502344-1504330 Arabidopsis thaliana
AT1G05190 0.5kb upstream 0.5kb upstream 500 false Chr1: 1503831-1504330 Arabidopsis thaliana
AT1G05190 0.5kb downstream 0.5kb downstream 1987 true Chr1: 1501844-1503830 Arabidopsis thaliana
AT1G05190 0.5kb downstream 0.5kb downstream 500 false Chr1: 1501844-1502343 Arabidopsis thaliana
AT1G05190 1.0kb upstream 1.0kb upstream 2487 true Chr1: 1502344-1504830 Arabidopsis thaliana
AT1G05190 1.0kb upstream 1.0kb upstream 1000 false Chr1: 1503831-1504830 Arabidopsis thaliana
AT1G05190 1.0kb downstream 1.0kb downstream 2487 true Chr1: 1501344-1503830 Arabidopsis thaliana
AT1G05190 1.0kb downstream 1.0kb downstream 1000 false Chr1: 1501344-1502343 Arabidopsis thaliana
AT1G05190 2.0kb upstream 2.0kb upstream 3487 true Chr1: 1502344-1505830 Arabidopsis thaliana
AT1G05190 2.0kb upstream 2.0kb upstream 2000 false Chr1: 1503831-1505830 Arabidopsis thaliana
AT1G05190 2.0kb downstream 2.0kb downstream 3487 true Chr1: 1500344-1503830 Arabidopsis thaliana
AT1G05190 2.0kb downstream 2.0kb downstream 2000 false Chr1: 1500344-1502343 Arabidopsis thaliana
AT1G05190 5.0kb upstream 5.0kb upstream 6487 true Chr1: 1502344-1508830 Arabidopsis thaliana
AT1G05190 5.0kb upstream 5.0kb upstream 5000 false Chr1: 1503831-1508830 Arabidopsis thaliana
AT1G05190 5.0kb downstream 5.0kb downstream 6487 true Chr1: 1497344-1503830 Arabidopsis thaliana
AT1G05190 5.0kb downstream 5.0kb downstream 5000 false Chr1: 1497344-1502343 Arabidopsis thaliana
AT1G05190 10.0kb upstream 10.0kb upstream 11487 true Chr1: 1502344-1513830 Arabidopsis thaliana
AT1G05190 10.0kb upstream 10.0kb upstream 10000 false Chr1: 1503831-1513830 Arabidopsis thaliana
AT1G05190 10.0kb downstream 10.0kb downstream 11487 true Chr1: 1492344-1503830 Arabidopsis thaliana
AT1G05190 10.0kb downstream 10.0kb downstream 10000 false Chr1: 1492344-1502343 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376149 5261 Brassicaceae View MSA
123827537 5264 Brassicales-Malvales View MSA
124341305 5266 SBM View MSA
124239766 5268 Malvidae View MSA
124063333 5270 Rosid View MSA
123740010 5271 Pentapetalae View MSA
122786185 5272 Eudicot View MSA
122045909 5273 Angiosperm View MSA
121344403 5274 Embryophyte View MSA
123424152 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 240.606     High  
cufflinks 12.439        
cufflinks 263.504     High  
cufflinks 10.454        
cufflinks 187.991     High  
cufflinks 10.954        

0 Strain