Gene : AT1G05240 A. thaliana TAIR10
Defline:  (1 of 78) 1.11.1.7 - Peroxidase / Lactoperoxidase Genomic Order:  447
Name:  ? AT1G05240 Secondary Identifier:  ? PAC:19657003
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Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5466 Arabidopsis thaliana pathologic  
Athaliana PWY-7214 Arabidopsis thaliana pathologic  
Athaliana PWY-7445 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G05240 0.5kb upstream 0.5kb upstream 2045 true Chr1: 1520637-1522681 Arabidopsis thaliana
AT1G05240 0.5kb upstream 0.5kb upstream 500 false Chr1: 1520637-1521136 Arabidopsis thaliana
AT1G05240 0.5kb downstream 0.5kb downstream 2045 true Chr1: 1521137-1523181 Arabidopsis thaliana
AT1G05240 0.5kb downstream 0.5kb downstream 500 false Chr1: 1522682-1523181 Arabidopsis thaliana
AT1G05240 1.0kb upstream 1.0kb upstream 2545 true Chr1: 1520137-1522681 Arabidopsis thaliana
AT1G05240 1.0kb upstream 1.0kb upstream 1000 false Chr1: 1520137-1521136 Arabidopsis thaliana
AT1G05240 1.0kb downstream 1.0kb downstream 2545 true Chr1: 1521137-1523681 Arabidopsis thaliana
AT1G05240 1.0kb downstream 1.0kb downstream 1000 false Chr1: 1522682-1523681 Arabidopsis thaliana
AT1G05240 2.0kb upstream 2.0kb upstream 3545 true Chr1: 1519137-1522681 Arabidopsis thaliana
AT1G05240 2.0kb upstream 2.0kb upstream 2000 false Chr1: 1519137-1521136 Arabidopsis thaliana
AT1G05240 2.0kb downstream 2.0kb downstream 3545 true Chr1: 1521137-1524681 Arabidopsis thaliana
AT1G05240 2.0kb downstream 2.0kb downstream 2000 false Chr1: 1522682-1524681 Arabidopsis thaliana
AT1G05240 5.0kb upstream 5.0kb upstream 6545 true Chr1: 1516137-1522681 Arabidopsis thaliana
AT1G05240 5.0kb upstream 5.0kb upstream 5000 false Chr1: 1516137-1521136 Arabidopsis thaliana
AT1G05240 5.0kb downstream 5.0kb downstream 6545 true Chr1: 1521137-1527681 Arabidopsis thaliana
AT1G05240 5.0kb downstream 5.0kb downstream 5000 false Chr1: 1522682-1527681 Arabidopsis thaliana
AT1G05240 10.0kb upstream 10.0kb upstream 11545 true Chr1: 1511137-1522681 Arabidopsis thaliana
AT1G05240 10.0kb upstream 10.0kb upstream 10000 false Chr1: 1511137-1521136 Arabidopsis thaliana
AT1G05240 10.0kb downstream 10.0kb downstream 11545 true Chr1: 1521137-1532681 Arabidopsis thaliana
AT1G05240 10.0kb downstream 10.0kb downstream 10000 false Chr1: 1522682-1532681 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377741 5261 Brassicaceae View MSA
123841316 5264 Brassicales-Malvales View MSA
124340691 5266 SBM View MSA
124241136 5268 Malvidae View MSA
124071148 5270 Rosid View MSA
123748177 5271 Pentapetalae View MSA
122794454 5272 Eudicot View MSA
122051577 5273 Angiosperm View MSA
121351674 5274 Embryophyte View MSA
123426672 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.03     Low  

0 Strain