Gene : AT1G05070 A. thaliana TAIR10
Defline:  (1 of 5) PF06364 - Protein of unknown function (DUF1068) (DUF1068) Genomic Order:  429
Name:  ? AT1G05070 Secondary Identifier:  ? PAC:19652721
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G05070 0.5kb upstream 0.5kb upstream 2182 true Chr1: 1457063-1459244 Arabidopsis thaliana
AT1G05070 0.5kb upstream 0.5kb upstream 500 false Chr1: 1458745-1459244 Arabidopsis thaliana
AT1G05070 0.5kb downstream 0.5kb downstream 2182 true Chr1: 1456563-1458744 Arabidopsis thaliana
AT1G05070 0.5kb downstream 0.5kb downstream 500 false Chr1: 1456563-1457062 Arabidopsis thaliana
AT1G05070 1.0kb upstream 1.0kb upstream 2682 true Chr1: 1457063-1459744 Arabidopsis thaliana
AT1G05070 1.0kb upstream 1.0kb upstream 1000 false Chr1: 1458745-1459744 Arabidopsis thaliana
AT1G05070 1.0kb downstream 1.0kb downstream 2682 true Chr1: 1456063-1458744 Arabidopsis thaliana
AT1G05070 1.0kb downstream 1.0kb downstream 1000 false Chr1: 1456063-1457062 Arabidopsis thaliana
AT1G05070 2.0kb upstream 2.0kb upstream 3682 true Chr1: 1457063-1460744 Arabidopsis thaliana
AT1G05070 2.0kb upstream 2.0kb upstream 2000 false Chr1: 1458745-1460744 Arabidopsis thaliana
AT1G05070 2.0kb downstream 2.0kb downstream 3682 true Chr1: 1455063-1458744 Arabidopsis thaliana
AT1G05070 2.0kb downstream 2.0kb downstream 2000 false Chr1: 1455063-1457062 Arabidopsis thaliana
AT1G05070 5.0kb upstream 5.0kb upstream 6682 true Chr1: 1457063-1463744 Arabidopsis thaliana
AT1G05070 5.0kb upstream 5.0kb upstream 5000 false Chr1: 1458745-1463744 Arabidopsis thaliana
AT1G05070 5.0kb downstream 5.0kb downstream 6682 true Chr1: 1452063-1458744 Arabidopsis thaliana
AT1G05070 5.0kb downstream 5.0kb downstream 5000 false Chr1: 1452063-1457062 Arabidopsis thaliana
AT1G05070 10.0kb upstream 10.0kb upstream 11682 true Chr1: 1457063-1468744 Arabidopsis thaliana
AT1G05070 10.0kb upstream 10.0kb upstream 10000 false Chr1: 1458745-1468744 Arabidopsis thaliana
AT1G05070 10.0kb downstream 10.0kb downstream 11682 true Chr1: 1447063-1458744 Arabidopsis thaliana
AT1G05070 10.0kb downstream 10.0kb downstream 10000 false Chr1: 1447063-1457062 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371464 5261 Brassicaceae View MSA
123838591 5264 Brassicales-Malvales View MSA
124338530 5266 SBM View MSA
124244025 5268 Malvidae View MSA
124061642 5270 Rosid View MSA
123748678 5271 Pentapetalae View MSA
122794910 5272 Eudicot View MSA
122051636 5273 Angiosperm View MSA
121349582 5274 Embryophyte View MSA
123381363 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.946        
cufflinks 12.695       High
cufflinks 7.482       Low
cufflinks 11.924        
cufflinks 7.982        
cufflinks 11.813        

0 Strain