Gene : AT1G04830 A. thaliana TAIR10
Defline:  (1 of 2) PTHR22957//PTHR22957:SF329 - TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  402
Name:  ? AT1G04830 Secondary Identifier:  ? PAC:19649182
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G04830 0.5kb upstream 0.5kb upstream 3946 true Chr1: 1358574-1362519 Arabidopsis thaliana
AT1G04830 0.5kb upstream 0.5kb upstream 500 false Chr1: 1362020-1362519 Arabidopsis thaliana
AT1G04830 0.5kb downstream 0.5kb downstream 3946 true Chr1: 1358074-1362019 Arabidopsis thaliana
AT1G04830 0.5kb downstream 0.5kb downstream 500 false Chr1: 1358074-1358573 Arabidopsis thaliana
AT1G04830 1.0kb upstream 1.0kb upstream 4446 true Chr1: 1358574-1363019 Arabidopsis thaliana
AT1G04830 1.0kb upstream 1.0kb upstream 1000 false Chr1: 1362020-1363019 Arabidopsis thaliana
AT1G04830 1.0kb downstream 1.0kb downstream 4446 true Chr1: 1357574-1362019 Arabidopsis thaliana
AT1G04830 1.0kb downstream 1.0kb downstream 1000 false Chr1: 1357574-1358573 Arabidopsis thaliana
AT1G04830 2.0kb upstream 2.0kb upstream 5446 true Chr1: 1358574-1364019 Arabidopsis thaliana
AT1G04830 2.0kb upstream 2.0kb upstream 2000 false Chr1: 1362020-1364019 Arabidopsis thaliana
AT1G04830 2.0kb downstream 2.0kb downstream 5446 true Chr1: 1356574-1362019 Arabidopsis thaliana
AT1G04830 2.0kb downstream 2.0kb downstream 2000 false Chr1: 1356574-1358573 Arabidopsis thaliana
AT1G04830 5.0kb upstream 5.0kb upstream 8446 true Chr1: 1358574-1367019 Arabidopsis thaliana
AT1G04830 5.0kb upstream 5.0kb upstream 5000 false Chr1: 1362020-1367019 Arabidopsis thaliana
AT1G04830 5.0kb downstream 5.0kb downstream 8446 true Chr1: 1353574-1362019 Arabidopsis thaliana
AT1G04830 5.0kb downstream 5.0kb downstream 5000 false Chr1: 1353574-1358573 Arabidopsis thaliana
AT1G04830 10.0kb upstream 10.0kb upstream 13446 true Chr1: 1358574-1372019 Arabidopsis thaliana
AT1G04830 10.0kb upstream 10.0kb upstream 10000 false Chr1: 1362020-1372019 Arabidopsis thaliana
AT1G04830 10.0kb downstream 10.0kb downstream 13446 true Chr1: 1348574-1362019 Arabidopsis thaliana
AT1G04830 10.0kb downstream 10.0kb downstream 10000 false Chr1: 1348574-1358573 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373482 5261 Brassicaceae View MSA
123841303 5264 Brassicales-Malvales View MSA
124336454 5266 SBM View MSA
124246260 5268 Malvidae View MSA
124070393 5270 Rosid View MSA
123742752 5271 Pentapetalae View MSA
122794560 5272 Eudicot View MSA
122050353 5273 Angiosperm View MSA
121347647 5274 Embryophyte View MSA
123426413 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.34        
cufflinks 4.781       High
cufflinks 3.086       Low
cufflinks 5.037       High
cufflinks 3.369        
cufflinks 3.976        

0 Strain