Gene : AT1G33700 A. thaliana TAIR10
Defline:  (1 of 2) PTHR12654:SF8 - NON-LYSOSOMAL GLUCOSYLCERAMIDASE Genomic Order:  3321
Name:  ? AT1G33700 Secondary Identifier:  ? PAC:19653695
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G33700 0.5kb upstream 0.5kb upstream 6375 true Chr1: 12208308-12214682 Arabidopsis thaliana
AT1G33700 0.5kb upstream 0.5kb upstream 500 false Chr1: 12214183-12214682 Arabidopsis thaliana
AT1G33700 0.5kb downstream 0.5kb downstream 6375 true Chr1: 12207808-12214182 Arabidopsis thaliana
AT1G33700 0.5kb downstream 0.5kb downstream 500 false Chr1: 12207808-12208307 Arabidopsis thaliana
AT1G33700 1.0kb upstream 1.0kb upstream 6875 true Chr1: 12208308-12215182 Arabidopsis thaliana
AT1G33700 1.0kb upstream 1.0kb upstream 1000 false Chr1: 12214183-12215182 Arabidopsis thaliana
AT1G33700 1.0kb downstream 1.0kb downstream 6875 true Chr1: 12207308-12214182 Arabidopsis thaliana
AT1G33700 1.0kb downstream 1.0kb downstream 1000 false Chr1: 12207308-12208307 Arabidopsis thaliana
AT1G33700 2.0kb upstream 2.0kb upstream 7875 true Chr1: 12208308-12216182 Arabidopsis thaliana
AT1G33700 2.0kb upstream 2.0kb upstream 2000 false Chr1: 12214183-12216182 Arabidopsis thaliana
AT1G33700 2.0kb downstream 2.0kb downstream 7875 true Chr1: 12206308-12214182 Arabidopsis thaliana
AT1G33700 2.0kb downstream 2.0kb downstream 2000 false Chr1: 12206308-12208307 Arabidopsis thaliana
AT1G33700 5.0kb upstream 5.0kb upstream 10875 true Chr1: 12208308-12219182 Arabidopsis thaliana
AT1G33700 5.0kb upstream 5.0kb upstream 5000 false Chr1: 12214183-12219182 Arabidopsis thaliana
AT1G33700 5.0kb downstream 5.0kb downstream 10875 true Chr1: 12203308-12214182 Arabidopsis thaliana
AT1G33700 5.0kb downstream 5.0kb downstream 5000 false Chr1: 12203308-12208307 Arabidopsis thaliana
AT1G33700 10.0kb upstream 10.0kb upstream 15875 true Chr1: 12208308-12224182 Arabidopsis thaliana
AT1G33700 10.0kb upstream 10.0kb upstream 10000 false Chr1: 12214183-12224182 Arabidopsis thaliana
AT1G33700 10.0kb downstream 10.0kb downstream 15875 true Chr1: 12198308-12214182 Arabidopsis thaliana
AT1G33700 10.0kb downstream 10.0kb downstream 10000 false Chr1: 12198308-12208307 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121510564 5273 Angiosperm View MSA
122365464 5261 Brassicaceae View MSA
123798962 5264 Brassicales-Malvales View MSA
124296534 5266 SBM View MSA
124148658 5268 Malvidae View MSA
123874613 5270 Rosid View MSA
123458560 5271 Pentapetalae View MSA
122493964 5272 Eudicot View MSA
121351037 5274 Embryophyte View MSA
123425340 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.511        
cufflinks 5.897        
cufflinks 0.407        
cufflinks 8.43       High
cufflinks 0.306       Low
cufflinks 5.893        

0 Strain