Gene : AT1G33490 A. thaliana TAIR10
Defline:  (1 of 2) PF09835 - Uncharacterized protein conserved in bacteria (DUF2062) (DUF2062) Genomic Order:  3307
Name:  ? AT1G33490 Secondary Identifier:  ? PAC:19655322
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G33490 0.5kb upstream 0.5kb upstream 2205 true Chr1: 12150690-12152894 Arabidopsis thaliana
AT1G33490 0.5kb upstream 0.5kb upstream 500 false Chr1: 12152395-12152894 Arabidopsis thaliana
AT1G33490 0.5kb downstream 0.5kb downstream 2205 true Chr1: 12150190-12152394 Arabidopsis thaliana
AT1G33490 0.5kb downstream 0.5kb downstream 500 false Chr1: 12150190-12150689 Arabidopsis thaliana
AT1G33490 1.0kb upstream 1.0kb upstream 2705 true Chr1: 12150690-12153394 Arabidopsis thaliana
AT1G33490 1.0kb upstream 1.0kb upstream 1000 false Chr1: 12152395-12153394 Arabidopsis thaliana
AT1G33490 1.0kb downstream 1.0kb downstream 2705 true Chr1: 12149690-12152394 Arabidopsis thaliana
AT1G33490 1.0kb downstream 1.0kb downstream 1000 false Chr1: 12149690-12150689 Arabidopsis thaliana
AT1G33490 2.0kb upstream 2.0kb upstream 3705 true Chr1: 12150690-12154394 Arabidopsis thaliana
AT1G33490 2.0kb upstream 2.0kb upstream 2000 false Chr1: 12152395-12154394 Arabidopsis thaliana
AT1G33490 2.0kb downstream 2.0kb downstream 3705 true Chr1: 12148690-12152394 Arabidopsis thaliana
AT1G33490 2.0kb downstream 2.0kb downstream 2000 false Chr1: 12148690-12150689 Arabidopsis thaliana
AT1G33490 5.0kb upstream 5.0kb upstream 6705 true Chr1: 12150690-12157394 Arabidopsis thaliana
AT1G33490 5.0kb upstream 5.0kb upstream 5000 false Chr1: 12152395-12157394 Arabidopsis thaliana
AT1G33490 5.0kb downstream 5.0kb downstream 6705 true Chr1: 12145690-12152394 Arabidopsis thaliana
AT1G33490 5.0kb downstream 5.0kb downstream 5000 false Chr1: 12145690-12150689 Arabidopsis thaliana
AT1G33490 10.0kb upstream 10.0kb upstream 11705 true Chr1: 12150690-12162394 Arabidopsis thaliana
AT1G33490 10.0kb upstream 10.0kb upstream 10000 false Chr1: 12152395-12162394 Arabidopsis thaliana
AT1G33490 10.0kb downstream 10.0kb downstream 11705 true Chr1: 12140690-12152394 Arabidopsis thaliana
AT1G33490 10.0kb downstream 10.0kb downstream 10000 false Chr1: 12140690-12150689 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372653 5261 Brassicaceae View MSA
123841255 5264 Brassicales-Malvales View MSA
124338516 5266 SBM View MSA
124245038 5268 Malvidae View MSA
124065752 5270 Rosid View MSA
123747275 5271 Pentapetalae View MSA
122793637 5272 Eudicot View MSA
122044467 5273 Angiosperm View MSA
121347646 5274 Embryophyte View MSA
123380588 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.321        
cufflinks 12.622        
cufflinks 16.782        
cufflinks 12.228        
cufflinks 18.49        
cufflinks 9.93       Low

0 Strain