Gene : AT1G33120 A. thaliana TAIR10
Defline:  (1 of 3) K02940 - large subunit ribosomal protein L9e (RP-L9e, RPL9) Genomic Order:  3281
Name:  ? AT1G33120 Secondary Identifier:  ? PAC:19655186
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G33120 0.5kb upstream 0.5kb upstream 2124 true Chr1: 12010401-12012524 Arabidopsis thaliana
AT1G33120 0.5kb upstream 0.5kb upstream 500 false Chr1: 12010401-12010900 Arabidopsis thaliana
AT1G33120 0.5kb downstream 0.5kb downstream 2124 true Chr1: 12010901-12013024 Arabidopsis thaliana
AT1G33120 0.5kb downstream 0.5kb downstream 500 false Chr1: 12012525-12013024 Arabidopsis thaliana
AT1G33120 1.0kb upstream 1.0kb upstream 2624 true Chr1: 12009901-12012524 Arabidopsis thaliana
AT1G33120 1.0kb upstream 1.0kb upstream 1000 false Chr1: 12009901-12010900 Arabidopsis thaliana
AT1G33120 1.0kb downstream 1.0kb downstream 2624 true Chr1: 12010901-12013524 Arabidopsis thaliana
AT1G33120 1.0kb downstream 1.0kb downstream 1000 false Chr1: 12012525-12013524 Arabidopsis thaliana
AT1G33120 2.0kb upstream 2.0kb upstream 3624 true Chr1: 12008901-12012524 Arabidopsis thaliana
AT1G33120 2.0kb upstream 2.0kb upstream 2000 false Chr1: 12008901-12010900 Arabidopsis thaliana
AT1G33120 2.0kb downstream 2.0kb downstream 3624 true Chr1: 12010901-12014524 Arabidopsis thaliana
AT1G33120 2.0kb downstream 2.0kb downstream 2000 false Chr1: 12012525-12014524 Arabidopsis thaliana
AT1G33120 5.0kb upstream 5.0kb upstream 6624 true Chr1: 12005901-12012524 Arabidopsis thaliana
AT1G33120 5.0kb upstream 5.0kb upstream 5000 false Chr1: 12005901-12010900 Arabidopsis thaliana
AT1G33120 5.0kb downstream 5.0kb downstream 6624 true Chr1: 12010901-12017524 Arabidopsis thaliana
AT1G33120 5.0kb downstream 5.0kb downstream 5000 false Chr1: 12012525-12017524 Arabidopsis thaliana
AT1G33120 10.0kb upstream 10.0kb upstream 11624 true Chr1: 12000901-12012524 Arabidopsis thaliana
AT1G33120 10.0kb upstream 10.0kb upstream 10000 false Chr1: 12000901-12010900 Arabidopsis thaliana
AT1G33120 10.0kb downstream 10.0kb downstream 11624 true Chr1: 12010901-12022524 Arabidopsis thaliana
AT1G33120 10.0kb downstream 10.0kb downstream 10000 false Chr1: 12012525-12022524 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380735 5261 Brassicaceae View MSA
123841658 5264 Brassicales-Malvales View MSA
124341839 5266 SBM View MSA
124245092 5268 Malvidae View MSA
124074174 5270 Rosid View MSA
123746970 5271 Pentapetalae View MSA
122791041 5272 Eudicot View MSA
122049178 5273 Angiosperm View MSA
121350412 5274 Embryophyte View MSA
123424125 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 53.077     High  
cufflinks 64.093     High  
cufflinks 54.519     High  
cufflinks 60.095     High  
cufflinks 45.202     High Low
cufflinks 63.094     High  

0 Strain