Gene : AT1G33320 A. thaliana TAIR10
Defline:  (1 of 2) 2.5.1.48 - Cystathionine gamma-synthase / O-succinylhomoserine synthetase Genomic Order:  3293
Name:  ? AT1G33320 Secondary Identifier:  ? PAC:19655952
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G33320 0.5kb upstream 0.5kb upstream 2954 true Chr1: 12080509-12083462 Arabidopsis thaliana
AT1G33320 0.5kb upstream 0.5kb upstream 500 false Chr1: 12080509-12081008 Arabidopsis thaliana
AT1G33320 0.5kb downstream 0.5kb downstream 2954 true Chr1: 12081009-12083962 Arabidopsis thaliana
AT1G33320 0.5kb downstream 0.5kb downstream 500 false Chr1: 12083463-12083962 Arabidopsis thaliana
AT1G33320 1.0kb upstream 1.0kb upstream 3454 true Chr1: 12080009-12083462 Arabidopsis thaliana
AT1G33320 1.0kb upstream 1.0kb upstream 1000 false Chr1: 12080009-12081008 Arabidopsis thaliana
AT1G33320 1.0kb downstream 1.0kb downstream 3454 true Chr1: 12081009-12084462 Arabidopsis thaliana
AT1G33320 1.0kb downstream 1.0kb downstream 1000 false Chr1: 12083463-12084462 Arabidopsis thaliana
AT1G33320 2.0kb upstream 2.0kb upstream 4454 true Chr1: 12079009-12083462 Arabidopsis thaliana
AT1G33320 2.0kb upstream 2.0kb upstream 2000 false Chr1: 12079009-12081008 Arabidopsis thaliana
AT1G33320 2.0kb downstream 2.0kb downstream 4454 true Chr1: 12081009-12085462 Arabidopsis thaliana
AT1G33320 2.0kb downstream 2.0kb downstream 2000 false Chr1: 12083463-12085462 Arabidopsis thaliana
AT1G33320 5.0kb upstream 5.0kb upstream 7454 true Chr1: 12076009-12083462 Arabidopsis thaliana
AT1G33320 5.0kb upstream 5.0kb upstream 5000 false Chr1: 12076009-12081008 Arabidopsis thaliana
AT1G33320 5.0kb downstream 5.0kb downstream 7454 true Chr1: 12081009-12088462 Arabidopsis thaliana
AT1G33320 5.0kb downstream 5.0kb downstream 5000 false Chr1: 12083463-12088462 Arabidopsis thaliana
AT1G33320 10.0kb upstream 10.0kb upstream 12454 true Chr1: 12071009-12083462 Arabidopsis thaliana
AT1G33320 10.0kb upstream 10.0kb upstream 10000 false Chr1: 12071009-12081008 Arabidopsis thaliana
AT1G33320 10.0kb downstream 10.0kb downstream 12454 true Chr1: 12081009-12093462 Arabidopsis thaliana
AT1G33320 10.0kb downstream 10.0kb downstream 10000 false Chr1: 12083463-12093462 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041119 5273 Angiosperm View MSA
122381963 5261 Brassicaceae View MSA
123838406 5264 Brassicales-Malvales View MSA
124338415 5266 SBM View MSA
124237929 5268 Malvidae View MSA
124067979 5270 Rosid View MSA
123738660 5271 Pentapetalae View MSA
122791406 5272 Eudicot View MSA
121346184 5274 Embryophyte View MSA
123428336 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.005     Low Low
cufflinks 0.129     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.123     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.396        

0 Strain