Gene : AT1G32980 A. thaliana TAIR10
Defline:  (1 of 11) PTHR10795:SF316 - SERINE PROTEASE-LIKE PROTEIN-RELATED Genomic Order:  3266
Name:  ? AT1G32980 Secondary Identifier:  ? PAC:19655310
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G32980 0.5kb upstream 0.5kb upstream 1585 true Chr1: 11954278-11955862 Arabidopsis thaliana
AT1G32980 0.5kb upstream 0.5kb upstream 500 false Chr1: 11955363-11955862 Arabidopsis thaliana
AT1G32980 0.5kb downstream 0.5kb downstream 1585 true Chr1: 11953778-11955362 Arabidopsis thaliana
AT1G32980 0.5kb downstream 0.5kb downstream 500 false Chr1: 11953778-11954277 Arabidopsis thaliana
AT1G32980 1.0kb upstream 1.0kb upstream 2085 true Chr1: 11954278-11956362 Arabidopsis thaliana
AT1G32980 1.0kb upstream 1.0kb upstream 1000 false Chr1: 11955363-11956362 Arabidopsis thaliana
AT1G32980 1.0kb downstream 1.0kb downstream 2085 true Chr1: 11953278-11955362 Arabidopsis thaliana
AT1G32980 1.0kb downstream 1.0kb downstream 1000 false Chr1: 11953278-11954277 Arabidopsis thaliana
AT1G32980 2.0kb upstream 2.0kb upstream 3085 true Chr1: 11954278-11957362 Arabidopsis thaliana
AT1G32980 2.0kb upstream 2.0kb upstream 2000 false Chr1: 11955363-11957362 Arabidopsis thaliana
AT1G32980 2.0kb downstream 2.0kb downstream 3085 true Chr1: 11952278-11955362 Arabidopsis thaliana
AT1G32980 2.0kb downstream 2.0kb downstream 2000 false Chr1: 11952278-11954277 Arabidopsis thaliana
AT1G32980 5.0kb upstream 5.0kb upstream 6085 true Chr1: 11954278-11960362 Arabidopsis thaliana
AT1G32980 5.0kb upstream 5.0kb upstream 5000 false Chr1: 11955363-11960362 Arabidopsis thaliana
AT1G32980 5.0kb downstream 5.0kb downstream 6085 true Chr1: 11949278-11955362 Arabidopsis thaliana
AT1G32980 5.0kb downstream 5.0kb downstream 5000 false Chr1: 11949278-11954277 Arabidopsis thaliana
AT1G32980 10.0kb upstream 10.0kb upstream 11085 true Chr1: 11954278-11965362 Arabidopsis thaliana
AT1G32980 10.0kb upstream 10.0kb upstream 10000 false Chr1: 11955363-11965362 Arabidopsis thaliana
AT1G32980 10.0kb downstream 10.0kb downstream 11085 true Chr1: 11944278-11955362 Arabidopsis thaliana
AT1G32980 10.0kb downstream 10.0kb downstream 10000 false Chr1: 11944278-11954277 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122328839 5261 Brassicaceae Singleton cluster - no MSA
123770172 5264 Brassicales-Malvales Singleton cluster - no MSA
124268717 5266 SBM Singleton cluster - no MSA
124254159 5268 Malvidae View MSA
124074709 5270 Rosid View MSA
123751509 5271 Pentapetalae View MSA
122797256 5272 Eudicot View MSA
122051606 5273 Angiosperm View MSA
121349729 5274 Embryophyte View MSA
123428602 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.014     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.015     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.029     Low High

0 Strain