Gene : AT1G32120 A. thaliana TAIR10
Defline:  (1 of 1) PTHR16007:SF15 - TRANSMEMBRANE PROTEIN 45B Genomic Order:  3179
Name:  ? AT1G32120 Secondary Identifier:  ? PAC:19650181
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G32120 0.5kb upstream 0.5kb upstream 6352 true Chr1: 11552426-11558777 Arabidopsis thaliana
AT1G32120 0.5kb upstream 0.5kb upstream 500 false Chr1: 11552426-11552925 Arabidopsis thaliana
AT1G32120 0.5kb downstream 0.5kb downstream 6352 true Chr1: 11552926-11559277 Arabidopsis thaliana
AT1G32120 0.5kb downstream 0.5kb downstream 500 false Chr1: 11558778-11559277 Arabidopsis thaliana
AT1G32120 1.0kb upstream 1.0kb upstream 6852 true Chr1: 11551926-11558777 Arabidopsis thaliana
AT1G32120 1.0kb upstream 1.0kb upstream 1000 false Chr1: 11551926-11552925 Arabidopsis thaliana
AT1G32120 1.0kb downstream 1.0kb downstream 6852 true Chr1: 11552926-11559777 Arabidopsis thaliana
AT1G32120 1.0kb downstream 1.0kb downstream 1000 false Chr1: 11558778-11559777 Arabidopsis thaliana
AT1G32120 2.0kb upstream 2.0kb upstream 7852 true Chr1: 11550926-11558777 Arabidopsis thaliana
AT1G32120 2.0kb upstream 2.0kb upstream 2000 false Chr1: 11550926-11552925 Arabidopsis thaliana
AT1G32120 2.0kb downstream 2.0kb downstream 7852 true Chr1: 11552926-11560777 Arabidopsis thaliana
AT1G32120 2.0kb downstream 2.0kb downstream 2000 false Chr1: 11558778-11560777 Arabidopsis thaliana
AT1G32120 5.0kb upstream 5.0kb upstream 10852 true Chr1: 11547926-11558777 Arabidopsis thaliana
AT1G32120 5.0kb upstream 5.0kb upstream 5000 false Chr1: 11547926-11552925 Arabidopsis thaliana
AT1G32120 5.0kb downstream 5.0kb downstream 10852 true Chr1: 11552926-11563777 Arabidopsis thaliana
AT1G32120 5.0kb downstream 5.0kb downstream 5000 false Chr1: 11558778-11563777 Arabidopsis thaliana
AT1G32120 10.0kb upstream 10.0kb upstream 15852 true Chr1: 11542926-11558777 Arabidopsis thaliana
AT1G32120 10.0kb upstream 10.0kb upstream 10000 false Chr1: 11542926-11552925 Arabidopsis thaliana
AT1G32120 10.0kb downstream 10.0kb downstream 15852 true Chr1: 11552926-11568777 Arabidopsis thaliana
AT1G32120 10.0kb downstream 10.0kb downstream 10000 false Chr1: 11558778-11568777 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027649 5273 Angiosperm View MSA
122366347 5261 Brassicaceae View MSA
123838896 5264 Brassicales-Malvales View MSA
124322514 5266 SBM View MSA
124250657 5268 Malvidae View MSA
124071323 5270 Rosid View MSA
123752946 5271 Pentapetalae View MSA
122774876 5272 Eudicot View MSA
121297275 5274 Embryophyte View MSA
123335348 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.757        
cufflinks 1.807        
cufflinks 1.291       Low
cufflinks 2.414       High
cufflinks 1.66        
cufflinks 2.203        

0 Strain