Gene : AT1G31530 A. thaliana TAIR10
Defline:  (1 of 2) PTHR12121//PTHR12121:SF42 - CARBON CATABOLITE REPRESSOR PROTEIN 4 // CARBON CATABOLITE REPRESSOR PROTEIN 4 HOMOLOG 4-RELATED Genomic Order:  3124
Name:  ? AT1G31530 Secondary Identifier:  ? PAC:19656852
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G31530 0.5kb upstream 0.5kb upstream 1781 true Chr1: 11281188-11282968 Arabidopsis thaliana
AT1G31530 0.5kb upstream 0.5kb upstream 500 false Chr1: 11282469-11282968 Arabidopsis thaliana
AT1G31530 0.5kb downstream 0.5kb downstream 1781 true Chr1: 11280688-11282468 Arabidopsis thaliana
AT1G31530 0.5kb downstream 0.5kb downstream 500 false Chr1: 11280688-11281187 Arabidopsis thaliana
AT1G31530 1.0kb upstream 1.0kb upstream 2281 true Chr1: 11281188-11283468 Arabidopsis thaliana
AT1G31530 1.0kb upstream 1.0kb upstream 1000 false Chr1: 11282469-11283468 Arabidopsis thaliana
AT1G31530 1.0kb downstream 1.0kb downstream 2281 true Chr1: 11280188-11282468 Arabidopsis thaliana
AT1G31530 1.0kb downstream 1.0kb downstream 1000 false Chr1: 11280188-11281187 Arabidopsis thaliana
AT1G31530 2.0kb upstream 2.0kb upstream 3281 true Chr1: 11281188-11284468 Arabidopsis thaliana
AT1G31530 2.0kb upstream 2.0kb upstream 2000 false Chr1: 11282469-11284468 Arabidopsis thaliana
AT1G31530 2.0kb downstream 2.0kb downstream 3281 true Chr1: 11279188-11282468 Arabidopsis thaliana
AT1G31530 2.0kb downstream 2.0kb downstream 2000 false Chr1: 11279188-11281187 Arabidopsis thaliana
AT1G31530 5.0kb upstream 5.0kb upstream 6281 true Chr1: 11281188-11287468 Arabidopsis thaliana
AT1G31530 5.0kb upstream 5.0kb upstream 5000 false Chr1: 11282469-11287468 Arabidopsis thaliana
AT1G31530 5.0kb downstream 5.0kb downstream 6281 true Chr1: 11276188-11282468 Arabidopsis thaliana
AT1G31530 5.0kb downstream 5.0kb downstream 5000 false Chr1: 11276188-11281187 Arabidopsis thaliana
AT1G31530 10.0kb upstream 10.0kb upstream 11281 true Chr1: 11281188-11292468 Arabidopsis thaliana
AT1G31530 10.0kb upstream 10.0kb upstream 10000 false Chr1: 11282469-11292468 Arabidopsis thaliana
AT1G31530 10.0kb downstream 10.0kb downstream 11281 true Chr1: 11271188-11282468 Arabidopsis thaliana
AT1G31530 10.0kb downstream 10.0kb downstream 10000 false Chr1: 11271188-11281187 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122031029 5273 Angiosperm View MSA
122328975 5261 Brassicaceae Singleton cluster - no MSA
123770299 5264 Brassicales-Malvales Singleton cluster - no MSA
124268841 5266 SBM Singleton cluster - no MSA
124125015 5268 Malvidae Singleton cluster - no MSA
123854011 5270 Rosid Singleton cluster - no MSA
123440044 5271 Pentapetalae Singleton cluster - no MSA
122475634 5272 Eudicot Singleton cluster - no MSA
121300129 5274 Embryophyte View MSA
123428031 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain