Gene : AGO2 A. thaliana TAIR10
Primary Identifier:  ? AT1G31280 Defline:  (1 of 2) PTHR22891//PTHR22891:SF4 - EUKARYOTIC TRANSLATION INITIATION FACTOR 2C // PROTEIN ARGONAUTE 2-RELATED
Genomic Order:  3097 Name:  ? AT1G31280
Secondary Identifier:  ? PAC:19656712
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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G31280 0.5kb upstream 0.5kb upstream 4134 true Chr1: 11181211-11185344 Arabidopsis thaliana
AT1G31280 0.5kb upstream 0.5kb upstream 500 false Chr1: 11181211-11181710 Arabidopsis thaliana
AT1G31280 0.5kb downstream 0.5kb downstream 4134 true Chr1: 11181711-11185844 Arabidopsis thaliana
AT1G31280 0.5kb downstream 0.5kb downstream 500 false Chr1: 11185345-11185844 Arabidopsis thaliana
AT1G31280 1.0kb upstream 1.0kb upstream 4634 true Chr1: 11180711-11185344 Arabidopsis thaliana
AT1G31280 1.0kb upstream 1.0kb upstream 1000 false Chr1: 11180711-11181710 Arabidopsis thaliana
AT1G31280 1.0kb downstream 1.0kb downstream 4634 true Chr1: 11181711-11186344 Arabidopsis thaliana
AT1G31280 1.0kb downstream 1.0kb downstream 1000 false Chr1: 11185345-11186344 Arabidopsis thaliana
AT1G31280 2.0kb upstream 2.0kb upstream 5634 true Chr1: 11179711-11185344 Arabidopsis thaliana
AT1G31280 2.0kb upstream 2.0kb upstream 2000 false Chr1: 11179711-11181710 Arabidopsis thaliana
AT1G31280 2.0kb downstream 2.0kb downstream 5634 true Chr1: 11181711-11187344 Arabidopsis thaliana
AT1G31280 2.0kb downstream 2.0kb downstream 2000 false Chr1: 11185345-11187344 Arabidopsis thaliana
AT1G31280 5.0kb upstream 5.0kb upstream 8634 true Chr1: 11176711-11185344 Arabidopsis thaliana
AT1G31280 5.0kb upstream 5.0kb upstream 5000 false Chr1: 11176711-11181710 Arabidopsis thaliana
AT1G31280 5.0kb downstream 5.0kb downstream 8634 true Chr1: 11181711-11190344 Arabidopsis thaliana
AT1G31280 5.0kb downstream 5.0kb downstream 5000 false Chr1: 11185345-11190344 Arabidopsis thaliana
AT1G31280 10.0kb upstream 10.0kb upstream 13634 true Chr1: 11171711-11185344 Arabidopsis thaliana
AT1G31280 10.0kb upstream 10.0kb upstream 10000 false Chr1: 11171711-11181710 Arabidopsis thaliana
AT1G31280 10.0kb downstream 10.0kb downstream 13634 true Chr1: 11181711-11195344 Arabidopsis thaliana
AT1G31280 10.0kb downstream 10.0kb downstream 10000 false Chr1: 11185345-11195344 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369824 5261 Brassicaceae View MSA
123841261 5264 Brassicales-Malvales View MSA
124336671 5266 SBM View MSA
124249828 5268 Malvidae View MSA
124060672 5270 Rosid View MSA
123745241 5271 Pentapetalae View MSA
122793461 5272 Eudicot View MSA
122049484 5273 Angiosperm View MSA
121311429 5274 Embryophyte View MSA
123428465 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.737        
cufflinks 10.129        
cufflinks 7.323       Low
cufflinks 11.249        
cufflinks 8.235        
cufflinks 12.039       High

0 Strain