Gene : AT1G31040 A. thaliana TAIR10
Defline:  (1 of 1) PTHR31065:SF14 - PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN Genomic Order:  3075
Name:  ? AT1G31040 Secondary Identifier:  ? PAC:19650486
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G31040 0.5kb upstream 0.5kb upstream 2999 true Chr1: 11069793-11072791 Arabidopsis thaliana
AT1G31040 0.5kb upstream 0.5kb upstream 500 false Chr1: 11072292-11072791 Arabidopsis thaliana
AT1G31040 0.5kb downstream 0.5kb downstream 2999 true Chr1: 11069293-11072291 Arabidopsis thaliana
AT1G31040 0.5kb downstream 0.5kb downstream 500 false Chr1: 11069293-11069792 Arabidopsis thaliana
AT1G31040 1.0kb upstream 1.0kb upstream 3499 true Chr1: 11069793-11073291 Arabidopsis thaliana
AT1G31040 1.0kb upstream 1.0kb upstream 1000 false Chr1: 11072292-11073291 Arabidopsis thaliana
AT1G31040 1.0kb downstream 1.0kb downstream 3499 true Chr1: 11068793-11072291 Arabidopsis thaliana
AT1G31040 1.0kb downstream 1.0kb downstream 1000 false Chr1: 11068793-11069792 Arabidopsis thaliana
AT1G31040 2.0kb upstream 2.0kb upstream 4499 true Chr1: 11069793-11074291 Arabidopsis thaliana
AT1G31040 2.0kb upstream 2.0kb upstream 2000 false Chr1: 11072292-11074291 Arabidopsis thaliana
AT1G31040 2.0kb downstream 2.0kb downstream 4499 true Chr1: 11067793-11072291 Arabidopsis thaliana
AT1G31040 2.0kb downstream 2.0kb downstream 2000 false Chr1: 11067793-11069792 Arabidopsis thaliana
AT1G31040 5.0kb upstream 5.0kb upstream 7499 true Chr1: 11069793-11077291 Arabidopsis thaliana
AT1G31040 5.0kb upstream 5.0kb upstream 5000 false Chr1: 11072292-11077291 Arabidopsis thaliana
AT1G31040 5.0kb downstream 5.0kb downstream 7499 true Chr1: 11064793-11072291 Arabidopsis thaliana
AT1G31040 5.0kb downstream 5.0kb downstream 5000 false Chr1: 11064793-11069792 Arabidopsis thaliana
AT1G31040 10.0kb upstream 10.0kb upstream 12499 true Chr1: 11069793-11082291 Arabidopsis thaliana
AT1G31040 10.0kb upstream 10.0kb upstream 10000 false Chr1: 11072292-11082291 Arabidopsis thaliana
AT1G31040 10.0kb downstream 10.0kb downstream 12499 true Chr1: 11059793-11072291 Arabidopsis thaliana
AT1G31040 10.0kb downstream 10.0kb downstream 10000 false Chr1: 11059793-11069792 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379537 5261 Brassicaceae View MSA
123834444 5264 Brassicales-Malvales View MSA
124339643 5266 SBM View MSA
124252918 5268 Malvidae View MSA
124068522 5270 Rosid View MSA
123747069 5271 Pentapetalae View MSA
122791391 5272 Eudicot View MSA
122044768 5273 Angiosperm View MSA
121349888 5274 Embryophyte View MSA
123428703 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.378        
cufflinks 0.637        
cufflinks 0.26     Low  
cufflinks 1.258       High
cufflinks 0.354        
cufflinks 0.305     Low  

0 Strain