Gene : AT1G30990 A. thaliana TAIR10
Defline:  (1 of 11) PTHR31338:SF15 - F17F8.9-RELATED Genomic Order:  3071
Name:  ? AT1G30990 Secondary Identifier:  ? PAC:19655942
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G30990 0.5kb upstream 0.5kb upstream 1434 true Chr1: 11051630-11053063 Arabidopsis thaliana
AT1G30990 0.5kb upstream 0.5kb upstream 500 false Chr1: 11051630-11052129 Arabidopsis thaliana
AT1G30990 0.5kb downstream 0.5kb downstream 1434 true Chr1: 11052130-11053563 Arabidopsis thaliana
AT1G30990 0.5kb downstream 0.5kb downstream 500 false Chr1: 11053064-11053563 Arabidopsis thaliana
AT1G30990 1.0kb upstream 1.0kb upstream 1934 true Chr1: 11051130-11053063 Arabidopsis thaliana
AT1G30990 1.0kb upstream 1.0kb upstream 1000 false Chr1: 11051130-11052129 Arabidopsis thaliana
AT1G30990 1.0kb downstream 1.0kb downstream 1934 true Chr1: 11052130-11054063 Arabidopsis thaliana
AT1G30990 1.0kb downstream 1.0kb downstream 1000 false Chr1: 11053064-11054063 Arabidopsis thaliana
AT1G30990 2.0kb upstream 2.0kb upstream 2934 true Chr1: 11050130-11053063 Arabidopsis thaliana
AT1G30990 2.0kb upstream 2.0kb upstream 2000 false Chr1: 11050130-11052129 Arabidopsis thaliana
AT1G30990 2.0kb downstream 2.0kb downstream 2934 true Chr1: 11052130-11055063 Arabidopsis thaliana
AT1G30990 2.0kb downstream 2.0kb downstream 2000 false Chr1: 11053064-11055063 Arabidopsis thaliana
AT1G30990 5.0kb upstream 5.0kb upstream 5934 true Chr1: 11047130-11053063 Arabidopsis thaliana
AT1G30990 5.0kb upstream 5.0kb upstream 5000 false Chr1: 11047130-11052129 Arabidopsis thaliana
AT1G30990 5.0kb downstream 5.0kb downstream 5934 true Chr1: 11052130-11058063 Arabidopsis thaliana
AT1G30990 5.0kb downstream 5.0kb downstream 5000 false Chr1: 11053064-11058063 Arabidopsis thaliana
AT1G30990 10.0kb upstream 10.0kb upstream 10934 true Chr1: 11042130-11053063 Arabidopsis thaliana
AT1G30990 10.0kb upstream 10.0kb upstream 10000 false Chr1: 11042130-11052129 Arabidopsis thaliana
AT1G30990 10.0kb downstream 10.0kb downstream 10934 true Chr1: 11052130-11063063 Arabidopsis thaliana
AT1G30990 10.0kb downstream 10.0kb downstream 10000 false Chr1: 11053064-11063063 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122344247 5261 Brassicaceae View MSA
123784279 5264 Brassicales-Malvales View MSA
124282472 5266 SBM View MSA
124254765 5268 Malvidae View MSA
124074728 5270 Rosid View MSA
123752132 5271 Pentapetalae View MSA
122796960 5272 Eudicot View MSA
122046763 5273 Angiosperm View MSA
121351454 5274 Embryophyte View MSA
123382173 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.057     Low  
cufflinks 0.373        
cufflinks 0.015     Low Low
cufflinks 0.846        
cufflinks 0.029     Low  
cufflinks 1.552       High

0 Strain