Gene : AT1G30760 A. thaliana TAIR10
Defline:  (1 of 5) PTHR32448//PTHR32448:SF11 - FAMILY NOT NAMED // BERBERINE BRIDGE ENZYME-RELATED Genomic Order:  3045
Name:  ? AT1G30760 Secondary Identifier:  ? PAC:19655389
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G30760 0.5kb upstream 0.5kb upstream 2900 true Chr1: 10917778-10920677 Arabidopsis thaliana
AT1G30760 0.5kb upstream 0.5kb upstream 500 false Chr1: 10917778-10918277 Arabidopsis thaliana
AT1G30760 0.5kb downstream 0.5kb downstream 2900 true Chr1: 10918278-10921177 Arabidopsis thaliana
AT1G30760 0.5kb downstream 0.5kb downstream 500 false Chr1: 10920678-10921177 Arabidopsis thaliana
AT1G30760 1.0kb upstream 1.0kb upstream 3400 true Chr1: 10917278-10920677 Arabidopsis thaliana
AT1G30760 1.0kb upstream 1.0kb upstream 1000 false Chr1: 10917278-10918277 Arabidopsis thaliana
AT1G30760 1.0kb downstream 1.0kb downstream 3400 true Chr1: 10918278-10921677 Arabidopsis thaliana
AT1G30760 1.0kb downstream 1.0kb downstream 1000 false Chr1: 10920678-10921677 Arabidopsis thaliana
AT1G30760 2.0kb upstream 2.0kb upstream 4400 true Chr1: 10916278-10920677 Arabidopsis thaliana
AT1G30760 2.0kb upstream 2.0kb upstream 2000 false Chr1: 10916278-10918277 Arabidopsis thaliana
AT1G30760 2.0kb downstream 2.0kb downstream 4400 true Chr1: 10918278-10922677 Arabidopsis thaliana
AT1G30760 2.0kb downstream 2.0kb downstream 2000 false Chr1: 10920678-10922677 Arabidopsis thaliana
AT1G30760 5.0kb upstream 5.0kb upstream 7400 true Chr1: 10913278-10920677 Arabidopsis thaliana
AT1G30760 5.0kb upstream 5.0kb upstream 5000 false Chr1: 10913278-10918277 Arabidopsis thaliana
AT1G30760 5.0kb downstream 5.0kb downstream 7400 true Chr1: 10918278-10925677 Arabidopsis thaliana
AT1G30760 5.0kb downstream 5.0kb downstream 5000 false Chr1: 10920678-10925677 Arabidopsis thaliana
AT1G30760 10.0kb upstream 10.0kb upstream 12400 true Chr1: 10908278-10920677 Arabidopsis thaliana
AT1G30760 10.0kb upstream 10.0kb upstream 10000 false Chr1: 10908278-10918277 Arabidopsis thaliana
AT1G30760 10.0kb downstream 10.0kb downstream 12400 true Chr1: 10918278-10930677 Arabidopsis thaliana
AT1G30760 10.0kb downstream 10.0kb downstream 10000 false Chr1: 10920678-10930677 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379742 5261 Brassicaceae View MSA
123836663 5264 Brassicales-Malvales View MSA
124350887 5266 SBM View MSA
124245179 5268 Malvidae View MSA
124070066 5270 Rosid View MSA
123750008 5271 Pentapetalae View MSA
122797707 5272 Eudicot View MSA
122049918 5273 Angiosperm View MSA
121351151 5274 Embryophyte View MSA
123426970 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.093     Low  
cufflinks 16.708        
cufflinks 0.05     Low Low
cufflinks 20.956        
cufflinks 0.092     Low  
cufflinks 15.338        

0 Strain