Gene : AT1G30810 A. thaliana TAIR10
Defline:  (1 of 3) PTHR10694:SF41 - JUMONJI DOMAIN-CONTAINING PROTEIN 18-RELATED Genomic Order:  3049
Name:  ? AT1G30810 Secondary Identifier:  ? PAC:19654365
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G30810 0.5kb upstream 0.5kb upstream 6028 true Chr1: 10936765-10942792 Arabidopsis thaliana
AT1G30810 0.5kb upstream 0.5kb upstream 500 false Chr1: 10942293-10942792 Arabidopsis thaliana
AT1G30810 0.5kb downstream 0.5kb downstream 6028 true Chr1: 10936265-10942292 Arabidopsis thaliana
AT1G30810 0.5kb downstream 0.5kb downstream 500 false Chr1: 10936265-10936764 Arabidopsis thaliana
AT1G30810 1.0kb upstream 1.0kb upstream 6528 true Chr1: 10936765-10943292 Arabidopsis thaliana
AT1G30810 1.0kb upstream 1.0kb upstream 1000 false Chr1: 10942293-10943292 Arabidopsis thaliana
AT1G30810 1.0kb downstream 1.0kb downstream 6528 true Chr1: 10935765-10942292 Arabidopsis thaliana
AT1G30810 1.0kb downstream 1.0kb downstream 1000 false Chr1: 10935765-10936764 Arabidopsis thaliana
AT1G30810 2.0kb upstream 2.0kb upstream 7528 true Chr1: 10936765-10944292 Arabidopsis thaliana
AT1G30810 2.0kb upstream 2.0kb upstream 2000 false Chr1: 10942293-10944292 Arabidopsis thaliana
AT1G30810 2.0kb downstream 2.0kb downstream 7528 true Chr1: 10934765-10942292 Arabidopsis thaliana
AT1G30810 2.0kb downstream 2.0kb downstream 2000 false Chr1: 10934765-10936764 Arabidopsis thaliana
AT1G30810 5.0kb upstream 5.0kb upstream 10528 true Chr1: 10936765-10947292 Arabidopsis thaliana
AT1G30810 5.0kb upstream 5.0kb upstream 5000 false Chr1: 10942293-10947292 Arabidopsis thaliana
AT1G30810 5.0kb downstream 5.0kb downstream 10528 true Chr1: 10931765-10942292 Arabidopsis thaliana
AT1G30810 5.0kb downstream 5.0kb downstream 5000 false Chr1: 10931765-10936764 Arabidopsis thaliana
AT1G30810 10.0kb upstream 10.0kb upstream 15528 true Chr1: 10936765-10952292 Arabidopsis thaliana
AT1G30810 10.0kb upstream 10.0kb upstream 10000 false Chr1: 10942293-10952292 Arabidopsis thaliana
AT1G30810 10.0kb downstream 10.0kb downstream 15528 true Chr1: 10926765-10942292 Arabidopsis thaliana
AT1G30810 10.0kb downstream 10.0kb downstream 10000 false Chr1: 10926765-10936764 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367331 5261 Brassicaceae View MSA
123838081 5264 Brassicales-Malvales View MSA
124345494 5266 SBM View MSA
124251575 5268 Malvidae View MSA
124068572 5270 Rosid View MSA
123751211 5271 Pentapetalae View MSA
122797514 5272 Eudicot View MSA
122050637 5273 Angiosperm View MSA
123428928 5275 Viridiplantae View MSA
121350129 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.084       High
cufflinks 5.187       High
cufflinks 3.344       Low
cufflinks 3.889        
cufflinks 3.4        
cufflinks 4.131        

0 Strain