Gene : AT1G30580 A. thaliana TAIR10
Defline:  (1 of 2) K06942 - uncharacterized protein (K06942) Genomic Order:  3025
Name:  ? AT1G30580 Secondary Identifier:  ? PAC:19656253
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G30580 0.5kb upstream 0.5kb upstream 4366 true Chr1: 10831673-10836038 Arabidopsis thaliana
AT1G30580 0.5kb upstream 0.5kb upstream 500 false Chr1: 10835539-10836038 Arabidopsis thaliana
AT1G30580 0.5kb downstream 0.5kb downstream 4366 true Chr1: 10831173-10835538 Arabidopsis thaliana
AT1G30580 0.5kb downstream 0.5kb downstream 500 false Chr1: 10831173-10831672 Arabidopsis thaliana
AT1G30580 1.0kb upstream 1.0kb upstream 4866 true Chr1: 10831673-10836538 Arabidopsis thaliana
AT1G30580 1.0kb upstream 1.0kb upstream 1000 false Chr1: 10835539-10836538 Arabidopsis thaliana
AT1G30580 1.0kb downstream 1.0kb downstream 4866 true Chr1: 10830673-10835538 Arabidopsis thaliana
AT1G30580 1.0kb downstream 1.0kb downstream 1000 false Chr1: 10830673-10831672 Arabidopsis thaliana
AT1G30580 2.0kb upstream 2.0kb upstream 5866 true Chr1: 10831673-10837538 Arabidopsis thaliana
AT1G30580 2.0kb upstream 2.0kb upstream 2000 false Chr1: 10835539-10837538 Arabidopsis thaliana
AT1G30580 2.0kb downstream 2.0kb downstream 5866 true Chr1: 10829673-10835538 Arabidopsis thaliana
AT1G30580 2.0kb downstream 2.0kb downstream 2000 false Chr1: 10829673-10831672 Arabidopsis thaliana
AT1G30580 5.0kb upstream 5.0kb upstream 8866 true Chr1: 10831673-10840538 Arabidopsis thaliana
AT1G30580 5.0kb upstream 5.0kb upstream 5000 false Chr1: 10835539-10840538 Arabidopsis thaliana
AT1G30580 5.0kb downstream 5.0kb downstream 8866 true Chr1: 10826673-10835538 Arabidopsis thaliana
AT1G30580 5.0kb downstream 5.0kb downstream 5000 false Chr1: 10826673-10831672 Arabidopsis thaliana
AT1G30580 10.0kb upstream 10.0kb upstream 13866 true Chr1: 10831673-10845538 Arabidopsis thaliana
AT1G30580 10.0kb upstream 10.0kb upstream 10000 false Chr1: 10835539-10845538 Arabidopsis thaliana
AT1G30580 10.0kb downstream 10.0kb downstream 13866 true Chr1: 10821673-10835538 Arabidopsis thaliana
AT1G30580 10.0kb downstream 10.0kb downstream 10000 false Chr1: 10821673-10831672 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365222 5261 Brassicaceae View MSA
123833821 5264 Brassicales-Malvales View MSA
124337919 5266 SBM View MSA
124239554 5268 Malvidae View MSA
124061212 5270 Rosid View MSA
123738167 5271 Pentapetalae View MSA
122793184 5272 Eudicot View MSA
122050132 5273 Angiosperm View MSA
121346594 5274 Embryophyte View MSA
123424688 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 46.936     High  
cufflinks 53.389     High  
cufflinks 45.387     High  
cufflinks 55.506     High  
cufflinks 42.128     High Low
cufflinks 60.216     High High

0 Strain