Gene : AT1G30690 A. thaliana TAIR10
Defline:  (1 of 1) PTHR23324//PTHR23324:SF85 - SEC14 RELATED PROTEIN // CELLULAR RETINALDEHYDE-BINDING/TRIPLE FUNCTION DOMAIN-CONTAINING PROTEIN Genomic Order:  3036
Name:  ? AT1G30690 Secondary Identifier:  ? PAC:19654359
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G30690 0.5kb upstream 0.5kb upstream 3226 true Chr1: 10887107-10890332 Arabidopsis thaliana
AT1G30690 0.5kb upstream 0.5kb upstream 500 false Chr1: 10887107-10887606 Arabidopsis thaliana
AT1G30690 0.5kb downstream 0.5kb downstream 3226 true Chr1: 10887607-10890832 Arabidopsis thaliana
AT1G30690 0.5kb downstream 0.5kb downstream 500 false Chr1: 10890333-10890832 Arabidopsis thaliana
AT1G30690 1.0kb upstream 1.0kb upstream 3726 true Chr1: 10886607-10890332 Arabidopsis thaliana
AT1G30690 1.0kb upstream 1.0kb upstream 1000 false Chr1: 10886607-10887606 Arabidopsis thaliana
AT1G30690 1.0kb downstream 1.0kb downstream 3726 true Chr1: 10887607-10891332 Arabidopsis thaliana
AT1G30690 1.0kb downstream 1.0kb downstream 1000 false Chr1: 10890333-10891332 Arabidopsis thaliana
AT1G30690 2.0kb upstream 2.0kb upstream 4726 true Chr1: 10885607-10890332 Arabidopsis thaliana
AT1G30690 2.0kb upstream 2.0kb upstream 2000 false Chr1: 10885607-10887606 Arabidopsis thaliana
AT1G30690 2.0kb downstream 2.0kb downstream 4726 true Chr1: 10887607-10892332 Arabidopsis thaliana
AT1G30690 2.0kb downstream 2.0kb downstream 2000 false Chr1: 10890333-10892332 Arabidopsis thaliana
AT1G30690 5.0kb upstream 5.0kb upstream 7726 true Chr1: 10882607-10890332 Arabidopsis thaliana
AT1G30690 5.0kb upstream 5.0kb upstream 5000 false Chr1: 10882607-10887606 Arabidopsis thaliana
AT1G30690 5.0kb downstream 5.0kb downstream 7726 true Chr1: 10887607-10895332 Arabidopsis thaliana
AT1G30690 5.0kb downstream 5.0kb downstream 5000 false Chr1: 10890333-10895332 Arabidopsis thaliana
AT1G30690 10.0kb upstream 10.0kb upstream 12726 true Chr1: 10877607-10890332 Arabidopsis thaliana
AT1G30690 10.0kb upstream 10.0kb upstream 10000 false Chr1: 10877607-10887606 Arabidopsis thaliana
AT1G30690 10.0kb downstream 10.0kb downstream 12726 true Chr1: 10887607-10900332 Arabidopsis thaliana
AT1G30690 10.0kb downstream 10.0kb downstream 10000 false Chr1: 10890333-10900332 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372901 5261 Brassicaceae View MSA
123839703 5264 Brassicales-Malvales View MSA
124343219 5266 SBM View MSA
124237776 5268 Malvidae View MSA
124067060 5270 Rosid View MSA
123749558 5271 Pentapetalae View MSA
122796481 5272 Eudicot View MSA
122048382 5273 Angiosperm View MSA
123429024 5275 Viridiplantae View MSA
121350193 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.22        
cufflinks 29.486     High  
cufflinks 9.426        
cufflinks 27.282        
cufflinks 7.055       Low
cufflinks 60.371     High High

0 Strain