Gene : AT1G30680 A. thaliana TAIR10
Defline:  (1 of 1) K17680 - twinkle protein [EC:3.6.4.12] (PEO1) Genomic Order:  3035
Name:  ? AT1G30680 Secondary Identifier:  ? PAC:19652477
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G30680 0.5kb upstream 0.5kb upstream 5329 true Chr1: 10881097-10886425 Arabidopsis thaliana
AT1G30680 0.5kb upstream 0.5kb upstream 500 false Chr1: 10881097-10881596 Arabidopsis thaliana
AT1G30680 0.5kb downstream 0.5kb downstream 5329 true Chr1: 10881597-10886925 Arabidopsis thaliana
AT1G30680 0.5kb downstream 0.5kb downstream 500 false Chr1: 10886426-10886925 Arabidopsis thaliana
AT1G30680 1.0kb upstream 1.0kb upstream 5829 true Chr1: 10880597-10886425 Arabidopsis thaliana
AT1G30680 1.0kb upstream 1.0kb upstream 1000 false Chr1: 10880597-10881596 Arabidopsis thaliana
AT1G30680 1.0kb downstream 1.0kb downstream 5829 true Chr1: 10881597-10887425 Arabidopsis thaliana
AT1G30680 1.0kb downstream 1.0kb downstream 1000 false Chr1: 10886426-10887425 Arabidopsis thaliana
AT1G30680 2.0kb upstream 2.0kb upstream 6829 true Chr1: 10879597-10886425 Arabidopsis thaliana
AT1G30680 2.0kb upstream 2.0kb upstream 2000 false Chr1: 10879597-10881596 Arabidopsis thaliana
AT1G30680 2.0kb downstream 2.0kb downstream 6829 true Chr1: 10881597-10888425 Arabidopsis thaliana
AT1G30680 2.0kb downstream 2.0kb downstream 2000 false Chr1: 10886426-10888425 Arabidopsis thaliana
AT1G30680 5.0kb upstream 5.0kb upstream 9829 true Chr1: 10876597-10886425 Arabidopsis thaliana
AT1G30680 5.0kb upstream 5.0kb upstream 5000 false Chr1: 10876597-10881596 Arabidopsis thaliana
AT1G30680 5.0kb downstream 5.0kb downstream 9829 true Chr1: 10881597-10891425 Arabidopsis thaliana
AT1G30680 5.0kb downstream 5.0kb downstream 5000 false Chr1: 10886426-10891425 Arabidopsis thaliana
AT1G30680 10.0kb upstream 10.0kb upstream 14829 true Chr1: 10871597-10886425 Arabidopsis thaliana
AT1G30680 10.0kb upstream 10.0kb upstream 10000 false Chr1: 10871597-10881596 Arabidopsis thaliana
AT1G30680 10.0kb downstream 10.0kb downstream 14829 true Chr1: 10881597-10896425 Arabidopsis thaliana
AT1G30680 10.0kb downstream 10.0kb downstream 10000 false Chr1: 10886426-10896425 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374950 5261 Brassicaceae View MSA
123829625 5264 Brassicales-Malvales View MSA
124339667 5266 SBM View MSA
124241424 5268 Malvidae View MSA
124064761 5270 Rosid View MSA
123739173 5271 Pentapetalae View MSA
122792850 5272 Eudicot View MSA
122043908 5273 Angiosperm View MSA
121344607 5274 Embryophyte View MSA
123424427 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.062        
cufflinks 3.124       Low
cufflinks 12.691        
cufflinks 4.256        
cufflinks 11.662        
cufflinks 3.754        

0 Strain