Gene : PSAK A. thaliana TAIR10
Primary Identifier:  ? AT1G30380 Defline:  (1 of 1) K02698 - photosystem I subunit X (psaK)
Genomic Order:  3003 Name:  ? AT1G30380
Secondary Identifier:  ? PAC:19654676
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PHOTOALL-PWY Arabidopsis thaliana pathologic  
Athaliana PWY-101 Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G30380 0.5kb upstream 0.5kb upstream 1551 true Chr1: 10721697-10723247 Arabidopsis thaliana
AT1G30380 0.5kb upstream 0.5kb upstream 500 false Chr1: 10721697-10722196 Arabidopsis thaliana
AT1G30380 0.5kb downstream 0.5kb downstream 1551 true Chr1: 10722197-10723747 Arabidopsis thaliana
AT1G30380 0.5kb downstream 0.5kb downstream 500 false Chr1: 10723248-10723747 Arabidopsis thaliana
AT1G30380 1.0kb upstream 1.0kb upstream 2051 true Chr1: 10721197-10723247 Arabidopsis thaliana
AT1G30380 1.0kb upstream 1.0kb upstream 1000 false Chr1: 10721197-10722196 Arabidopsis thaliana
AT1G30380 1.0kb downstream 1.0kb downstream 2051 true Chr1: 10722197-10724247 Arabidopsis thaliana
AT1G30380 1.0kb downstream 1.0kb downstream 1000 false Chr1: 10723248-10724247 Arabidopsis thaliana
AT1G30380 2.0kb upstream 2.0kb upstream 3051 true Chr1: 10720197-10723247 Arabidopsis thaliana
AT1G30380 2.0kb upstream 2.0kb upstream 2000 false Chr1: 10720197-10722196 Arabidopsis thaliana
AT1G30380 2.0kb downstream 2.0kb downstream 3051 true Chr1: 10722197-10725247 Arabidopsis thaliana
AT1G30380 2.0kb downstream 2.0kb downstream 2000 false Chr1: 10723248-10725247 Arabidopsis thaliana
AT1G30380 5.0kb upstream 5.0kb upstream 6051 true Chr1: 10717197-10723247 Arabidopsis thaliana
AT1G30380 5.0kb upstream 5.0kb upstream 5000 false Chr1: 10717197-10722196 Arabidopsis thaliana
AT1G30380 5.0kb downstream 5.0kb downstream 6051 true Chr1: 10722197-10728247 Arabidopsis thaliana
AT1G30380 5.0kb downstream 5.0kb downstream 5000 false Chr1: 10723248-10728247 Arabidopsis thaliana
AT1G30380 10.0kb upstream 10.0kb upstream 11051 true Chr1: 10712197-10723247 Arabidopsis thaliana
AT1G30380 10.0kb upstream 10.0kb upstream 10000 false Chr1: 10712197-10722196 Arabidopsis thaliana
AT1G30380 10.0kb downstream 10.0kb downstream 11051 true Chr1: 10722197-10733247 Arabidopsis thaliana
AT1G30380 10.0kb downstream 10.0kb downstream 10000 false Chr1: 10723248-10733247 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378578 5261 Brassicaceae View MSA
123833502 5264 Brassicales-Malvales View MSA
124342197 5266 SBM View MSA
124242965 5268 Malvidae View MSA
124064022 5270 Rosid View MSA
123739111 5271 Pentapetalae View MSA
122786435 5272 Eudicot View MSA
122044551 5273 Angiosperm View MSA
121347312 5274 Embryophyte View MSA
123425033 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 885.314     High  
cufflinks 2.645        
cufflinks 1288.062     High  
cufflinks 2.673        
cufflinks 1185.14     High  
cufflinks 1.733        

0 Strain