Gene : AT1G30455 A. thaliana TAIR10
Defline:  (1 of 2) KOG1598 - Transcription initiation factor TFIIIB, Brf1 subunit Genomic Order:  3009
Name:  ? AT1G30455 Secondary Identifier:  ? PAC:19651908
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G30455 0.5kb upstream 0.5kb upstream 1554 true Chr1: 10769222-10770775 Arabidopsis thaliana
AT1G30455 0.5kb upstream 0.5kb upstream 500 false Chr1: 10769222-10769721 Arabidopsis thaliana
AT1G30455 0.5kb downstream 0.5kb downstream 1554 true Chr1: 10769722-10771275 Arabidopsis thaliana
AT1G30455 0.5kb downstream 0.5kb downstream 500 false Chr1: 10770776-10771275 Arabidopsis thaliana
AT1G30455 1.0kb upstream 1.0kb upstream 2054 true Chr1: 10768722-10770775 Arabidopsis thaliana
AT1G30455 1.0kb upstream 1.0kb upstream 1000 false Chr1: 10768722-10769721 Arabidopsis thaliana
AT1G30455 1.0kb downstream 1.0kb downstream 2054 true Chr1: 10769722-10771775 Arabidopsis thaliana
AT1G30455 1.0kb downstream 1.0kb downstream 1000 false Chr1: 10770776-10771775 Arabidopsis thaliana
AT1G30455 2.0kb upstream 2.0kb upstream 3054 true Chr1: 10767722-10770775 Arabidopsis thaliana
AT1G30455 2.0kb upstream 2.0kb upstream 2000 false Chr1: 10767722-10769721 Arabidopsis thaliana
AT1G30455 2.0kb downstream 2.0kb downstream 3054 true Chr1: 10769722-10772775 Arabidopsis thaliana
AT1G30455 2.0kb downstream 2.0kb downstream 2000 false Chr1: 10770776-10772775 Arabidopsis thaliana
AT1G30455 5.0kb upstream 5.0kb upstream 6054 true Chr1: 10764722-10770775 Arabidopsis thaliana
AT1G30455 5.0kb upstream 5.0kb upstream 5000 false Chr1: 10764722-10769721 Arabidopsis thaliana
AT1G30455 5.0kb downstream 5.0kb downstream 6054 true Chr1: 10769722-10775775 Arabidopsis thaliana
AT1G30455 5.0kb downstream 5.0kb downstream 5000 false Chr1: 10770776-10775775 Arabidopsis thaliana
AT1G30455 10.0kb upstream 10.0kb upstream 11054 true Chr1: 10759722-10770775 Arabidopsis thaliana
AT1G30455 10.0kb upstream 10.0kb upstream 10000 false Chr1: 10759722-10769721 Arabidopsis thaliana
AT1G30455 10.0kb downstream 10.0kb downstream 11054 true Chr1: 10769722-10780775 Arabidopsis thaliana
AT1G30455 10.0kb downstream 10.0kb downstream 10000 false Chr1: 10770776-10780775 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121493038 5273 Angiosperm View MSA
122328141 5261 Brassicaceae View MSA
123769521 5264 Brassicales-Malvales View MSA
124268080 5266 SBM View MSA
124124339 5268 Malvidae View MSA
123853391 5270 Rosid View MSA
123439478 5271 Pentapetalae View MSA
122475073 5272 Eudicot View MSA
120766414 5274 Embryophyte View MSA
122808821 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.041     Low  
cufflinks 0.273     Low  
cufflinks 0.02     Low Low
cufflinks 0.495       High
cufflinks 0.062     Low  
cufflinks 0.272     Low  

0 Strain