Gene : AT1G30320 A. thaliana TAIR10
Defline:  (1 of 17) PF03763 - Remorin, C-terminal region (Remorin_C) Genomic Order:  2998
Name:  ? AT1G30320 Secondary Identifier:  ? PAC:19650714
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G30320 0.5kb upstream 0.5kb upstream 3209 true Chr1: 10679746-10682954 Arabidopsis thaliana
AT1G30320 0.5kb upstream 0.5kb upstream 500 false Chr1: 10679746-10680245 Arabidopsis thaliana
AT1G30320 0.5kb downstream 0.5kb downstream 3209 true Chr1: 10680246-10683454 Arabidopsis thaliana
AT1G30320 0.5kb downstream 0.5kb downstream 500 false Chr1: 10682955-10683454 Arabidopsis thaliana
AT1G30320 1.0kb upstream 1.0kb upstream 3709 true Chr1: 10679246-10682954 Arabidopsis thaliana
AT1G30320 1.0kb upstream 1.0kb upstream 1000 false Chr1: 10679246-10680245 Arabidopsis thaliana
AT1G30320 1.0kb downstream 1.0kb downstream 3709 true Chr1: 10680246-10683954 Arabidopsis thaliana
AT1G30320 1.0kb downstream 1.0kb downstream 1000 false Chr1: 10682955-10683954 Arabidopsis thaliana
AT1G30320 2.0kb upstream 2.0kb upstream 4709 true Chr1: 10678246-10682954 Arabidopsis thaliana
AT1G30320 2.0kb upstream 2.0kb upstream 2000 false Chr1: 10678246-10680245 Arabidopsis thaliana
AT1G30320 2.0kb downstream 2.0kb downstream 4709 true Chr1: 10680246-10684954 Arabidopsis thaliana
AT1G30320 2.0kb downstream 2.0kb downstream 2000 false Chr1: 10682955-10684954 Arabidopsis thaliana
AT1G30320 5.0kb upstream 5.0kb upstream 7709 true Chr1: 10675246-10682954 Arabidopsis thaliana
AT1G30320 5.0kb upstream 5.0kb upstream 5000 false Chr1: 10675246-10680245 Arabidopsis thaliana
AT1G30320 5.0kb downstream 5.0kb downstream 7709 true Chr1: 10680246-10687954 Arabidopsis thaliana
AT1G30320 5.0kb downstream 5.0kb downstream 5000 false Chr1: 10682955-10687954 Arabidopsis thaliana
AT1G30320 10.0kb upstream 10.0kb upstream 12709 true Chr1: 10670246-10682954 Arabidopsis thaliana
AT1G30320 10.0kb upstream 10.0kb upstream 10000 false Chr1: 10670246-10680245 Arabidopsis thaliana
AT1G30320 10.0kb downstream 10.0kb downstream 12709 true Chr1: 10680246-10692954 Arabidopsis thaliana
AT1G30320 10.0kb downstream 10.0kb downstream 10000 false Chr1: 10682955-10692954 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372899 5261 Brassicaceae View MSA
123834325 5264 Brassicales-Malvales View MSA
124346399 5266 SBM View MSA
124251199 5268 Malvidae View MSA
124068503 5270 Rosid View MSA
123746801 5271 Pentapetalae View MSA
122786350 5272 Eudicot View MSA
122049282 5273 Angiosperm View MSA
121351512 5274 Embryophyte View MSA
123382200 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.069       Low
cufflinks 8.978        
cufflinks 9.119        
cufflinks 11.901       High
cufflinks 5.79       Low
cufflinks 9.71        

0 Strain