Gene : AT1G30070 A. thaliana TAIR10
Defline:  (1 of 1) K04507 - calcyclin binding protein (CACYBP, SIP) Genomic Order:  2975
Name:  ? AT1G30070 Secondary Identifier:  ? PAC:19649784
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G30070 0.5kb upstream 0.5kb upstream 2061 true Chr1: 10546591-10548651 Arabidopsis thaliana
AT1G30070 0.5kb upstream 0.5kb upstream 500 false Chr1: 10548152-10548651 Arabidopsis thaliana
AT1G30070 0.5kb downstream 0.5kb downstream 2061 true Chr1: 10546091-10548151 Arabidopsis thaliana
AT1G30070 0.5kb downstream 0.5kb downstream 500 false Chr1: 10546091-10546590 Arabidopsis thaliana
AT1G30070 1.0kb upstream 1.0kb upstream 2561 true Chr1: 10546591-10549151 Arabidopsis thaliana
AT1G30070 1.0kb upstream 1.0kb upstream 1000 false Chr1: 10548152-10549151 Arabidopsis thaliana
AT1G30070 1.0kb downstream 1.0kb downstream 2561 true Chr1: 10545591-10548151 Arabidopsis thaliana
AT1G30070 1.0kb downstream 1.0kb downstream 1000 false Chr1: 10545591-10546590 Arabidopsis thaliana
AT1G30070 2.0kb upstream 2.0kb upstream 3561 true Chr1: 10546591-10550151 Arabidopsis thaliana
AT1G30070 2.0kb upstream 2.0kb upstream 2000 false Chr1: 10548152-10550151 Arabidopsis thaliana
AT1G30070 2.0kb downstream 2.0kb downstream 3561 true Chr1: 10544591-10548151 Arabidopsis thaliana
AT1G30070 2.0kb downstream 2.0kb downstream 2000 false Chr1: 10544591-10546590 Arabidopsis thaliana
AT1G30070 5.0kb upstream 5.0kb upstream 6561 true Chr1: 10546591-10553151 Arabidopsis thaliana
AT1G30070 5.0kb upstream 5.0kb upstream 5000 false Chr1: 10548152-10553151 Arabidopsis thaliana
AT1G30070 5.0kb downstream 5.0kb downstream 6561 true Chr1: 10541591-10548151 Arabidopsis thaliana
AT1G30070 5.0kb downstream 5.0kb downstream 5000 false Chr1: 10541591-10546590 Arabidopsis thaliana
AT1G30070 10.0kb upstream 10.0kb upstream 11561 true Chr1: 10546591-10558151 Arabidopsis thaliana
AT1G30070 10.0kb upstream 10.0kb upstream 10000 false Chr1: 10548152-10558151 Arabidopsis thaliana
AT1G30070 10.0kb downstream 10.0kb downstream 11561 true Chr1: 10536591-10548151 Arabidopsis thaliana
AT1G30070 10.0kb downstream 10.0kb downstream 10000 false Chr1: 10536591-10546590 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376717 5261 Brassicaceae View MSA
123828267 5264 Brassicales-Malvales View MSA
124338025 5266 SBM View MSA
124240583 5268 Malvidae View MSA
124066952 5270 Rosid View MSA
123740321 5271 Pentapetalae View MSA
122786964 5272 Eudicot View MSA
122042327 5273 Angiosperm View MSA
121346100 5274 Embryophyte View MSA
123428860 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.013        
cufflinks 5.972        
cufflinks 2.883       Low
cufflinks 6.402        
cufflinks 3.088       Low
cufflinks 7.048       High

0 Strain