Gene : COR413IM1 A. thaliana TAIR10
Primary Identifier:  ? AT1G29395 Defline:  (1 of 2) PTHR33596//PTHR33596:SF3 - FAMILY NOT NAMED // COLD-REGULATED 413 INNER MEMBRANE PROTEIN 1, CHLOROPLASTIC-RELATED
Genomic Order:  2903 Name:  ? AT1G29395
Secondary Identifier:  ? PAC:19652713
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0 Pathways

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G29395 0.5kb upstream 0.5kb upstream 1925 true Chr1: 10288197-10290121 Arabidopsis thaliana
AT1G29395 0.5kb upstream 0.5kb upstream 500 false Chr1: 10289622-10290121 Arabidopsis thaliana
AT1G29395 0.5kb downstream 0.5kb downstream 1925 true Chr1: 10287697-10289621 Arabidopsis thaliana
AT1G29395 0.5kb downstream 0.5kb downstream 500 false Chr1: 10287697-10288196 Arabidopsis thaliana
AT1G29395 1.0kb upstream 1.0kb upstream 2425 true Chr1: 10288197-10290621 Arabidopsis thaliana
AT1G29395 1.0kb upstream 1.0kb upstream 1000 false Chr1: 10289622-10290621 Arabidopsis thaliana
AT1G29395 1.0kb downstream 1.0kb downstream 2425 true Chr1: 10287197-10289621 Arabidopsis thaliana
AT1G29395 1.0kb downstream 1.0kb downstream 1000 false Chr1: 10287197-10288196 Arabidopsis thaliana
AT1G29395 2.0kb upstream 2.0kb upstream 3425 true Chr1: 10288197-10291621 Arabidopsis thaliana
AT1G29395 2.0kb upstream 2.0kb upstream 2000 false Chr1: 10289622-10291621 Arabidopsis thaliana
AT1G29395 2.0kb downstream 2.0kb downstream 3425 true Chr1: 10286197-10289621 Arabidopsis thaliana
AT1G29395 2.0kb downstream 2.0kb downstream 2000 false Chr1: 10286197-10288196 Arabidopsis thaliana
AT1G29395 5.0kb upstream 5.0kb upstream 6425 true Chr1: 10288197-10294621 Arabidopsis thaliana
AT1G29395 5.0kb upstream 5.0kb upstream 5000 false Chr1: 10289622-10294621 Arabidopsis thaliana
AT1G29395 5.0kb downstream 5.0kb downstream 6425 true Chr1: 10283197-10289621 Arabidopsis thaliana
AT1G29395 5.0kb downstream 5.0kb downstream 5000 false Chr1: 10283197-10288196 Arabidopsis thaliana
AT1G29395 10.0kb upstream 10.0kb upstream 11425 true Chr1: 10288197-10299621 Arabidopsis thaliana
AT1G29395 10.0kb upstream 10.0kb upstream 10000 false Chr1: 10289622-10299621 Arabidopsis thaliana
AT1G29395 10.0kb downstream 10.0kb downstream 11425 true Chr1: 10278197-10289621 Arabidopsis thaliana
AT1G29395 10.0kb downstream 10.0kb downstream 10000 false Chr1: 10278197-10288196 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026496 5273 Angiosperm View MSA
122343296 5261 Brassicaceae View MSA
123783539 5264 Brassicales-Malvales View MSA
124346697 5266 SBM View MSA
124242929 5268 Malvidae View MSA
124068573 5270 Rosid View MSA
123739751 5271 Pentapetalae View MSA
122786208 5272 Eudicot View MSA
121350668 5274 Embryophyte View MSA
123381843 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 143.862     High  
cufflinks 14.062        
cufflinks 131.988     High  
cufflinks 11.185       Low
cufflinks 177.524     High High
cufflinks 13.715        

0 Strain