Gene : AT1G29440 A. thaliana TAIR10
Defline:  (1 of 9) PTHR31175//PTHR31175:SF1 - AUXIN-RESPONSIVE FAMILY PROTEIN // SAUR-LIKE AUXIN-RESPONSIVE PROTEIN-RELATED Genomic Order:  2909
Name:  ? AT1G29440 Secondary Identifier:  ? PAC:19650216
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G29440 0.5kb upstream 0.5kb upstream 1102 true Chr1: 10304507-10305608 Arabidopsis thaliana
AT1G29440 0.5kb upstream 0.5kb upstream 500 false Chr1: 10305109-10305608 Arabidopsis thaliana
AT1G29440 0.5kb downstream 0.5kb downstream 1102 true Chr1: 10304007-10305108 Arabidopsis thaliana
AT1G29440 0.5kb downstream 0.5kb downstream 500 false Chr1: 10304007-10304506 Arabidopsis thaliana
AT1G29440 1.0kb upstream 1.0kb upstream 1602 true Chr1: 10304507-10306108 Arabidopsis thaliana
AT1G29440 1.0kb upstream 1.0kb upstream 1000 false Chr1: 10305109-10306108 Arabidopsis thaliana
AT1G29440 1.0kb downstream 1.0kb downstream 1602 true Chr1: 10303507-10305108 Arabidopsis thaliana
AT1G29440 1.0kb downstream 1.0kb downstream 1000 false Chr1: 10303507-10304506 Arabidopsis thaliana
AT1G29440 2.0kb upstream 2.0kb upstream 2602 true Chr1: 10304507-10307108 Arabidopsis thaliana
AT1G29440 2.0kb upstream 2.0kb upstream 2000 false Chr1: 10305109-10307108 Arabidopsis thaliana
AT1G29440 2.0kb downstream 2.0kb downstream 2602 true Chr1: 10302507-10305108 Arabidopsis thaliana
AT1G29440 2.0kb downstream 2.0kb downstream 2000 false Chr1: 10302507-10304506 Arabidopsis thaliana
AT1G29440 5.0kb upstream 5.0kb upstream 5602 true Chr1: 10304507-10310108 Arabidopsis thaliana
AT1G29440 5.0kb upstream 5.0kb upstream 5000 false Chr1: 10305109-10310108 Arabidopsis thaliana
AT1G29440 5.0kb downstream 5.0kb downstream 5602 true Chr1: 10299507-10305108 Arabidopsis thaliana
AT1G29440 5.0kb downstream 5.0kb downstream 5000 false Chr1: 10299507-10304506 Arabidopsis thaliana
AT1G29440 10.0kb upstream 10.0kb upstream 10602 true Chr1: 10304507-10315108 Arabidopsis thaliana
AT1G29440 10.0kb upstream 10.0kb upstream 10000 false Chr1: 10305109-10315108 Arabidopsis thaliana
AT1G29440 10.0kb downstream 10.0kb downstream 10602 true Chr1: 10294507-10305108 Arabidopsis thaliana
AT1G29440 10.0kb downstream 10.0kb downstream 10000 false Chr1: 10294507-10304506 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381265 5261 Brassicaceae View MSA
123841637 5264 Brassicales-Malvales View MSA
124348096 5266 SBM View MSA
124254244 5268 Malvidae View MSA
124073380 5270 Rosid View MSA
123753786 5271 Pentapetalae View MSA
122797448 5272 Eudicot View MSA
122051602 5273 Angiosperm View MSA
121351344 5274 Embryophyte View MSA
123382129 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.942       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.637        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.57        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain