Gene : AT1G29450 A. thaliana TAIR10
Defline:  (1 of 9) PTHR31175//PTHR31175:SF1 - AUXIN-RESPONSIVE FAMILY PROTEIN // SAUR-LIKE AUXIN-RESPONSIVE PROTEIN-RELATED Genomic Order:  2910
Name:  ? AT1G29450 Secondary Identifier:  ? PAC:19649717
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G29450 0.5kb upstream 0.5kb upstream 1049 true Chr1: 10305951-10306999 Arabidopsis thaliana
AT1G29450 0.5kb upstream 0.5kb upstream 500 false Chr1: 10306500-10306999 Arabidopsis thaliana
AT1G29450 0.5kb downstream 0.5kb downstream 1049 true Chr1: 10305451-10306499 Arabidopsis thaliana
AT1G29450 0.5kb downstream 0.5kb downstream 500 false Chr1: 10305451-10305950 Arabidopsis thaliana
AT1G29450 1.0kb upstream 1.0kb upstream 1549 true Chr1: 10305951-10307499 Arabidopsis thaliana
AT1G29450 1.0kb upstream 1.0kb upstream 1000 false Chr1: 10306500-10307499 Arabidopsis thaliana
AT1G29450 1.0kb downstream 1.0kb downstream 1549 true Chr1: 10304951-10306499 Arabidopsis thaliana
AT1G29450 1.0kb downstream 1.0kb downstream 1000 false Chr1: 10304951-10305950 Arabidopsis thaliana
AT1G29450 2.0kb upstream 2.0kb upstream 2549 true Chr1: 10305951-10308499 Arabidopsis thaliana
AT1G29450 2.0kb upstream 2.0kb upstream 2000 false Chr1: 10306500-10308499 Arabidopsis thaliana
AT1G29450 2.0kb downstream 2.0kb downstream 2549 true Chr1: 10303951-10306499 Arabidopsis thaliana
AT1G29450 2.0kb downstream 2.0kb downstream 2000 false Chr1: 10303951-10305950 Arabidopsis thaliana
AT1G29450 5.0kb upstream 5.0kb upstream 5549 true Chr1: 10305951-10311499 Arabidopsis thaliana
AT1G29450 5.0kb upstream 5.0kb upstream 5000 false Chr1: 10306500-10311499 Arabidopsis thaliana
AT1G29450 5.0kb downstream 5.0kb downstream 5549 true Chr1: 10300951-10306499 Arabidopsis thaliana
AT1G29450 5.0kb downstream 5.0kb downstream 5000 false Chr1: 10300951-10305950 Arabidopsis thaliana
AT1G29450 10.0kb upstream 10.0kb upstream 10549 true Chr1: 10305951-10316499 Arabidopsis thaliana
AT1G29450 10.0kb upstream 10.0kb upstream 10000 false Chr1: 10306500-10316499 Arabidopsis thaliana
AT1G29450 10.0kb downstream 10.0kb downstream 10549 true Chr1: 10295951-10306499 Arabidopsis thaliana
AT1G29450 10.0kb downstream 10.0kb downstream 10000 false Chr1: 10295951-10305950 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381265 5261 Brassicaceae View MSA
123841637 5264 Brassicales-Malvales View MSA
124348096 5266 SBM View MSA
124254244 5268 Malvidae View MSA
124073380 5270 Rosid View MSA
123753786 5271 Pentapetalae View MSA
122797448 5272 Eudicot View MSA
122051602 5273 Angiosperm View MSA
121351344 5274 Embryophyte View MSA
123382129 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.119       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.874        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 3.236        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain