Gene : AT1G29220 A. thaliana TAIR10
Defline:  (1 of 1) PTHR13464 - TRANSCRIPTIONAL REGULATOR PROTEIN HCNGP Genomic Order:  2885
Name:  ? AT1G29220 Secondary Identifier:  ? PAC:19653775
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G29220 0.5kb upstream 0.5kb upstream 2703 true Chr1: 10210520-10213222 Arabidopsis thaliana
AT1G29220 0.5kb upstream 0.5kb upstream 500 false Chr1: 10212723-10213222 Arabidopsis thaliana
AT1G29220 0.5kb downstream 0.5kb downstream 2703 true Chr1: 10210020-10212722 Arabidopsis thaliana
AT1G29220 0.5kb downstream 0.5kb downstream 500 false Chr1: 10210020-10210519 Arabidopsis thaliana
AT1G29220 1.0kb upstream 1.0kb upstream 3203 true Chr1: 10210520-10213722 Arabidopsis thaliana
AT1G29220 1.0kb upstream 1.0kb upstream 1000 false Chr1: 10212723-10213722 Arabidopsis thaliana
AT1G29220 1.0kb downstream 1.0kb downstream 3203 true Chr1: 10209520-10212722 Arabidopsis thaliana
AT1G29220 1.0kb downstream 1.0kb downstream 1000 false Chr1: 10209520-10210519 Arabidopsis thaliana
AT1G29220 2.0kb upstream 2.0kb upstream 4203 true Chr1: 10210520-10214722 Arabidopsis thaliana
AT1G29220 2.0kb upstream 2.0kb upstream 2000 false Chr1: 10212723-10214722 Arabidopsis thaliana
AT1G29220 2.0kb downstream 2.0kb downstream 4203 true Chr1: 10208520-10212722 Arabidopsis thaliana
AT1G29220 2.0kb downstream 2.0kb downstream 2000 false Chr1: 10208520-10210519 Arabidopsis thaliana
AT1G29220 5.0kb upstream 5.0kb upstream 7203 true Chr1: 10210520-10217722 Arabidopsis thaliana
AT1G29220 5.0kb upstream 5.0kb upstream 5000 false Chr1: 10212723-10217722 Arabidopsis thaliana
AT1G29220 5.0kb downstream 5.0kb downstream 7203 true Chr1: 10205520-10212722 Arabidopsis thaliana
AT1G29220 5.0kb downstream 5.0kb downstream 5000 false Chr1: 10205520-10210519 Arabidopsis thaliana
AT1G29220 10.0kb upstream 10.0kb upstream 12203 true Chr1: 10210520-10222722 Arabidopsis thaliana
AT1G29220 10.0kb upstream 10.0kb upstream 10000 false Chr1: 10212723-10222722 Arabidopsis thaliana
AT1G29220 10.0kb downstream 10.0kb downstream 12203 true Chr1: 10200520-10212722 Arabidopsis thaliana
AT1G29220 10.0kb downstream 10.0kb downstream 10000 false Chr1: 10200520-10210519 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361317 5261 Brassicaceae View MSA
123833240 5264 Brassicales-Malvales View MSA
124338784 5266 SBM View MSA
124250561 5268 Malvidae View MSA
124067157 5270 Rosid View MSA
123739885 5271 Pentapetalae View MSA
122794219 5272 Eudicot View MSA
122042858 5273 Angiosperm View MSA
123429181 5275 Viridiplantae View MSA
121344834 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.16        
cufflinks 5.81        
cufflinks 4.171       Low
cufflinks 5.775        
cufflinks 4.001       Low
cufflinks 5.676        

0 Strain