Gene : AT1G29350 A. thaliana TAIR10
Defline:  (1 of 5) PTHR12758:SF20 - PEPTIDASE-C1 DOMAIN-CONTAINING PROTEIN Genomic Order:  2898
Name:  ? AT1G29350 Secondary Identifier:  ? PAC:19657158
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G29350 0.5kb upstream 0.5kb upstream 5820 true Chr1: 10268469-10274288 Arabidopsis thaliana
AT1G29350 0.5kb upstream 0.5kb upstream 500 false Chr1: 10273789-10274288 Arabidopsis thaliana
AT1G29350 0.5kb downstream 0.5kb downstream 5820 true Chr1: 10267969-10273788 Arabidopsis thaliana
AT1G29350 0.5kb downstream 0.5kb downstream 500 false Chr1: 10267969-10268468 Arabidopsis thaliana
AT1G29350 1.0kb upstream 1.0kb upstream 6320 true Chr1: 10268469-10274788 Arabidopsis thaliana
AT1G29350 1.0kb upstream 1.0kb upstream 1000 false Chr1: 10273789-10274788 Arabidopsis thaliana
AT1G29350 1.0kb downstream 1.0kb downstream 6320 true Chr1: 10267469-10273788 Arabidopsis thaliana
AT1G29350 1.0kb downstream 1.0kb downstream 1000 false Chr1: 10267469-10268468 Arabidopsis thaliana
AT1G29350 2.0kb upstream 2.0kb upstream 7320 true Chr1: 10268469-10275788 Arabidopsis thaliana
AT1G29350 2.0kb upstream 2.0kb upstream 2000 false Chr1: 10273789-10275788 Arabidopsis thaliana
AT1G29350 2.0kb downstream 2.0kb downstream 7320 true Chr1: 10266469-10273788 Arabidopsis thaliana
AT1G29350 2.0kb downstream 2.0kb downstream 2000 false Chr1: 10266469-10268468 Arabidopsis thaliana
AT1G29350 5.0kb upstream 5.0kb upstream 10320 true Chr1: 10268469-10278788 Arabidopsis thaliana
AT1G29350 5.0kb upstream 5.0kb upstream 5000 false Chr1: 10273789-10278788 Arabidopsis thaliana
AT1G29350 5.0kb downstream 5.0kb downstream 10320 true Chr1: 10263469-10273788 Arabidopsis thaliana
AT1G29350 5.0kb downstream 5.0kb downstream 5000 false Chr1: 10263469-10268468 Arabidopsis thaliana
AT1G29350 10.0kb upstream 10.0kb upstream 15320 true Chr1: 10268469-10283788 Arabidopsis thaliana
AT1G29350 10.0kb upstream 10.0kb upstream 10000 false Chr1: 10273789-10283788 Arabidopsis thaliana
AT1G29350 10.0kb downstream 10.0kb downstream 15320 true Chr1: 10258469-10273788 Arabidopsis thaliana
AT1G29350 10.0kb downstream 10.0kb downstream 10000 false Chr1: 10258469-10268468 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373253 5261 Brassicaceae View MSA
123839861 5264 Brassicales-Malvales View MSA
124340462 5266 SBM View MSA
124251231 5268 Malvidae View MSA
124065428 5270 Rosid View MSA
123746895 5271 Pentapetalae View MSA
122790736 5272 Eudicot View MSA
122047754 5273 Angiosperm View MSA
121350111 5274 Embryophyte View MSA
123424635 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.278        
cufflinks 8.581        
cufflinks 5.334       Low
cufflinks 9.883       High
cufflinks 6.181        
cufflinks 9.006        

0 Strain