Gene : AT1G29240 A. thaliana TAIR10
Defline:  (1 of 4) PTHR33671//PTHR33671:SF3 - FAMILY NOT NAMED // F28N24.8 PROTEIN Genomic Order:  2887
Name:  ? AT1G29240 Secondary Identifier:  ? PAC:19651881
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G29240 0.5kb upstream 0.5kb upstream 3568 true Chr1: 10216779-10220346 Arabidopsis thaliana
AT1G29240 0.5kb upstream 0.5kb upstream 500 false Chr1: 10219847-10220346 Arabidopsis thaliana
AT1G29240 0.5kb downstream 0.5kb downstream 3568 true Chr1: 10216279-10219846 Arabidopsis thaliana
AT1G29240 0.5kb downstream 0.5kb downstream 500 false Chr1: 10216279-10216778 Arabidopsis thaliana
AT1G29240 1.0kb upstream 1.0kb upstream 4068 true Chr1: 10216779-10220846 Arabidopsis thaliana
AT1G29240 1.0kb upstream 1.0kb upstream 1000 false Chr1: 10219847-10220846 Arabidopsis thaliana
AT1G29240 1.0kb downstream 1.0kb downstream 4068 true Chr1: 10215779-10219846 Arabidopsis thaliana
AT1G29240 1.0kb downstream 1.0kb downstream 1000 false Chr1: 10215779-10216778 Arabidopsis thaliana
AT1G29240 2.0kb upstream 2.0kb upstream 5068 true Chr1: 10216779-10221846 Arabidopsis thaliana
AT1G29240 2.0kb upstream 2.0kb upstream 2000 false Chr1: 10219847-10221846 Arabidopsis thaliana
AT1G29240 2.0kb downstream 2.0kb downstream 5068 true Chr1: 10214779-10219846 Arabidopsis thaliana
AT1G29240 2.0kb downstream 2.0kb downstream 2000 false Chr1: 10214779-10216778 Arabidopsis thaliana
AT1G29240 5.0kb upstream 5.0kb upstream 8068 true Chr1: 10216779-10224846 Arabidopsis thaliana
AT1G29240 5.0kb upstream 5.0kb upstream 5000 false Chr1: 10219847-10224846 Arabidopsis thaliana
AT1G29240 5.0kb downstream 5.0kb downstream 8068 true Chr1: 10211779-10219846 Arabidopsis thaliana
AT1G29240 5.0kb downstream 5.0kb downstream 5000 false Chr1: 10211779-10216778 Arabidopsis thaliana
AT1G29240 10.0kb upstream 10.0kb upstream 13068 true Chr1: 10216779-10229846 Arabidopsis thaliana
AT1G29240 10.0kb upstream 10.0kb upstream 10000 false Chr1: 10219847-10229846 Arabidopsis thaliana
AT1G29240 10.0kb downstream 10.0kb downstream 13068 true Chr1: 10206779-10219846 Arabidopsis thaliana
AT1G29240 10.0kb downstream 10.0kb downstream 10000 false Chr1: 10206779-10216778 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368097 5261 Brassicaceae View MSA
123838127 5264 Brassicales-Malvales View MSA
124338259 5266 SBM View MSA
124239697 5268 Malvidae View MSA
124068455 5270 Rosid View MSA
123745252 5271 Pentapetalae View MSA
122793682 5272 Eudicot View MSA
122048199 5273 Angiosperm View MSA
121349828 5274 Embryophyte View MSA
123381462 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.73       High
cufflinks 5.154        
cufflinks 4.822        
cufflinks 4.301        
cufflinks 4.624        
cufflinks 5.238        

0 Strain