Gene : AT1G29000 A. thaliana TAIR10
Defline:  (1 of 1) PTHR22814//PTHR22814:SF148 - COPPER TRANSPORT PROTEIN ATOX1-RELATED // F1K23.4 Genomic Order:  2862
Name:  ? AT1G29000 Secondary Identifier:  ? PAC:19654121
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G29000 0.5kb upstream 0.5kb upstream 1823 true Chr1: 10112518-10114340 Arabidopsis thaliana
AT1G29000 0.5kb upstream 0.5kb upstream 500 false Chr1: 10112518-10113017 Arabidopsis thaliana
AT1G29000 0.5kb downstream 0.5kb downstream 1823 true Chr1: 10113018-10114840 Arabidopsis thaliana
AT1G29000 0.5kb downstream 0.5kb downstream 500 false Chr1: 10114341-10114840 Arabidopsis thaliana
AT1G29000 1.0kb upstream 1.0kb upstream 2323 true Chr1: 10112018-10114340 Arabidopsis thaliana
AT1G29000 1.0kb upstream 1.0kb upstream 1000 false Chr1: 10112018-10113017 Arabidopsis thaliana
AT1G29000 1.0kb downstream 1.0kb downstream 2323 true Chr1: 10113018-10115340 Arabidopsis thaliana
AT1G29000 1.0kb downstream 1.0kb downstream 1000 false Chr1: 10114341-10115340 Arabidopsis thaliana
AT1G29000 2.0kb upstream 2.0kb upstream 3323 true Chr1: 10111018-10114340 Arabidopsis thaliana
AT1G29000 2.0kb upstream 2.0kb upstream 2000 false Chr1: 10111018-10113017 Arabidopsis thaliana
AT1G29000 2.0kb downstream 2.0kb downstream 3323 true Chr1: 10113018-10116340 Arabidopsis thaliana
AT1G29000 2.0kb downstream 2.0kb downstream 2000 false Chr1: 10114341-10116340 Arabidopsis thaliana
AT1G29000 5.0kb upstream 5.0kb upstream 6323 true Chr1: 10108018-10114340 Arabidopsis thaliana
AT1G29000 5.0kb upstream 5.0kb upstream 5000 false Chr1: 10108018-10113017 Arabidopsis thaliana
AT1G29000 5.0kb downstream 5.0kb downstream 6323 true Chr1: 10113018-10119340 Arabidopsis thaliana
AT1G29000 5.0kb downstream 5.0kb downstream 5000 false Chr1: 10114341-10119340 Arabidopsis thaliana
AT1G29000 10.0kb upstream 10.0kb upstream 11323 true Chr1: 10103018-10114340 Arabidopsis thaliana
AT1G29000 10.0kb upstream 10.0kb upstream 10000 false Chr1: 10103018-10113017 Arabidopsis thaliana
AT1G29000 10.0kb downstream 10.0kb downstream 11323 true Chr1: 10113018-10124340 Arabidopsis thaliana
AT1G29000 10.0kb downstream 10.0kb downstream 10000 false Chr1: 10114341-10124340 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370383 5261 Brassicaceae View MSA
123829251 5264 Brassicales-Malvales View MSA
124344996 5266 SBM View MSA
124241948 5268 Malvidae View MSA
124070367 5270 Rosid View MSA
123750804 5271 Pentapetalae View MSA
122795172 5272 Eudicot View MSA
122041833 5273 Angiosperm View MSA
121351529 5274 Embryophyte View MSA
123424750 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.011     Low Low
cufflinks 0.778        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.223        
cufflinks 0.009     Low Low
cufflinks 1.13        

0 Strain