Gene : LCR16 A. thaliana TAIR10
Primary Identifier:  ? AT1G49435 Defline:  (1 of 13) PTHR33830//PTHR33830:SF3 - FAMILY NOT NAMED // DEFENSIN-LIKE PROTEIN 122-RELATED
Genomic Order:  3971 Name:  ? AT1G49435
Secondary Identifier:  ? PAC:19651053
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G49435 0.5kb upstream 0.5kb upstream 933 true Chr1: 18299430-18300362 Arabidopsis thaliana
AT1G49435 0.5kb upstream 0.5kb upstream 500 false Chr1: 18299863-18300362 Arabidopsis thaliana
AT1G49435 0.5kb downstream 0.5kb downstream 933 true Chr1: 18298930-18299862 Arabidopsis thaliana
AT1G49435 0.5kb downstream 0.5kb downstream 500 false Chr1: 18298930-18299429 Arabidopsis thaliana
AT1G49435 1.0kb upstream 1.0kb upstream 1433 true Chr1: 18299430-18300862 Arabidopsis thaliana
AT1G49435 1.0kb upstream 1.0kb upstream 1000 false Chr1: 18299863-18300862 Arabidopsis thaliana
AT1G49435 1.0kb downstream 1.0kb downstream 1433 true Chr1: 18298430-18299862 Arabidopsis thaliana
AT1G49435 1.0kb downstream 1.0kb downstream 1000 false Chr1: 18298430-18299429 Arabidopsis thaliana
AT1G49435 2.0kb upstream 2.0kb upstream 2433 true Chr1: 18299430-18301862 Arabidopsis thaliana
AT1G49435 2.0kb upstream 2.0kb upstream 2000 false Chr1: 18299863-18301862 Arabidopsis thaliana
AT1G49435 2.0kb downstream 2.0kb downstream 2433 true Chr1: 18297430-18299862 Arabidopsis thaliana
AT1G49435 2.0kb downstream 2.0kb downstream 2000 false Chr1: 18297430-18299429 Arabidopsis thaliana
AT1G49435 5.0kb upstream 5.0kb upstream 5433 true Chr1: 18299430-18304862 Arabidopsis thaliana
AT1G49435 5.0kb upstream 5.0kb upstream 5000 false Chr1: 18299863-18304862 Arabidopsis thaliana
AT1G49435 5.0kb downstream 5.0kb downstream 5433 true Chr1: 18294430-18299862 Arabidopsis thaliana
AT1G49435 5.0kb downstream 5.0kb downstream 5000 false Chr1: 18294430-18299429 Arabidopsis thaliana
AT1G49435 10.0kb upstream 10.0kb upstream 10433 true Chr1: 18299430-18309862 Arabidopsis thaliana
AT1G49435 10.0kb upstream 10.0kb upstream 10000 false Chr1: 18299863-18309862 Arabidopsis thaliana
AT1G49435 10.0kb downstream 10.0kb downstream 10433 true Chr1: 18289430-18299862 Arabidopsis thaliana
AT1G49435 10.0kb downstream 10.0kb downstream 10000 false Chr1: 18289430-18299429 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792133 5273 Angiosperm View MSA
122382225 5261 Brassicaceae View MSA
123803758 5264 Brassicales-Malvales View MSA
124300833 5266 SBM View MSA
124251397 5268 Malvidae View MSA
124067401 5270 Rosid View MSA
123743891 5271 Pentapetalae View MSA
122796538 5272 Eudicot View MSA
121063384 5274 Embryophyte View MSA
123103137 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain