Gene : YUC10 A. thaliana TAIR10

Primary Identifier:  ? AT1G48910 Defline:  (1 of 1) PTHR23023//PTHR23023:SF135 - DIMETHYLANILINE MONOOXYGENASE // INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA10-RELATED
Genomic Order:  3918 Name:  ? AT1G48910
Secondary Identifier:  ? PAC:19650348

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWYDQC-4 Arabidopsis thaliana pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G48910 0.5kb upstream 0.5kb upstream 2594 true Chr1: 18091181-18093774 Arabidopsis thaliana
AT1G48910 0.5kb upstream 0.5kb upstream 500 false Chr1: 18091181-18091680 Arabidopsis thaliana
AT1G48910 0.5kb downstream 0.5kb downstream 2594 true Chr1: 18091681-18094274 Arabidopsis thaliana
AT1G48910 0.5kb downstream 0.5kb downstream 500 false Chr1: 18093775-18094274 Arabidopsis thaliana
AT1G48910 1.0kb upstream 1.0kb upstream 3094 true Chr1: 18090681-18093774 Arabidopsis thaliana
AT1G48910 1.0kb upstream 1.0kb upstream 1000 false Chr1: 18090681-18091680 Arabidopsis thaliana
AT1G48910 1.0kb downstream 1.0kb downstream 3094 true Chr1: 18091681-18094774 Arabidopsis thaliana
AT1G48910 1.0kb downstream 1.0kb downstream 1000 false Chr1: 18093775-18094774 Arabidopsis thaliana
AT1G48910 2.0kb upstream 2.0kb upstream 4094 true Chr1: 18089681-18093774 Arabidopsis thaliana
AT1G48910 2.0kb upstream 2.0kb upstream 2000 false Chr1: 18089681-18091680 Arabidopsis thaliana
AT1G48910 2.0kb downstream 2.0kb downstream 4094 true Chr1: 18091681-18095774 Arabidopsis thaliana
AT1G48910 2.0kb downstream 2.0kb downstream 2000 false Chr1: 18093775-18095774 Arabidopsis thaliana
AT1G48910 5.0kb upstream 5.0kb upstream 7094 true Chr1: 18086681-18093774 Arabidopsis thaliana
AT1G48910 5.0kb upstream 5.0kb upstream 5000 false Chr1: 18086681-18091680 Arabidopsis thaliana
AT1G48910 5.0kb downstream 5.0kb downstream 7094 true Chr1: 18091681-18098774 Arabidopsis thaliana
AT1G48910 5.0kb downstream 5.0kb downstream 5000 false Chr1: 18093775-18098774 Arabidopsis thaliana
AT1G48910 10.0kb upstream 10.0kb upstream 12094 true Chr1: 18081681-18093774 Arabidopsis thaliana
AT1G48910 10.0kb upstream 10.0kb upstream 10000 false Chr1: 18081681-18091680 Arabidopsis thaliana
AT1G48910 10.0kb downstream 10.0kb downstream 12094 true Chr1: 18091681-18103774 Arabidopsis thaliana
AT1G48910 10.0kb downstream 10.0kb downstream 10000 false Chr1: 18093775-18103774 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364658 5261 Brassicaceae View MSA
123829988 5264 Brassicales-Malvales View MSA
124349496 5266 SBM View MSA
124250017 5268 Malvidae View MSA
124069751 5270 Rosid View MSA
123749752 5271 Pentapetalae View MSA
122794899 5272 Eudicot View MSA
122047342 5273 Angiosperm View MSA
121310731 5274 Embryophyte View MSA
123348144 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain