Gene : ATHAL3B A. thaliana TAIR10
Primary Identifier:  ? AT1G48605 Defline:  (1 of 2) 4.1.1.36 - Phosphopantothenoylcysteine decarboxylase / N-((R)-4'-phosphopantothenoyl)-L-cysteine carboxy-lyase
Genomic Order:  3889 Name:  ? AT1G48605
Secondary Identifier:  ? PAC:19654666
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana COA-PWY Arabidopsis thaliana pathologic  

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G48605 0.5kb upstream 0.5kb upstream 1388 true Chr1: 17969395-17970782 Arabidopsis thaliana
AT1G48605 0.5kb upstream 0.5kb upstream 500 false Chr1: 17970283-17970782 Arabidopsis thaliana
AT1G48605 0.5kb downstream 0.5kb downstream 1388 true Chr1: 17968895-17970282 Arabidopsis thaliana
AT1G48605 0.5kb downstream 0.5kb downstream 500 false Chr1: 17968895-17969394 Arabidopsis thaliana
AT1G48605 1.0kb upstream 1.0kb upstream 1888 true Chr1: 17969395-17971282 Arabidopsis thaliana
AT1G48605 1.0kb upstream 1.0kb upstream 1000 false Chr1: 17970283-17971282 Arabidopsis thaliana
AT1G48605 1.0kb downstream 1.0kb downstream 1888 true Chr1: 17968395-17970282 Arabidopsis thaliana
AT1G48605 1.0kb downstream 1.0kb downstream 1000 false Chr1: 17968395-17969394 Arabidopsis thaliana
AT1G48605 2.0kb upstream 2.0kb upstream 2888 true Chr1: 17969395-17972282 Arabidopsis thaliana
AT1G48605 2.0kb upstream 2.0kb upstream 2000 false Chr1: 17970283-17972282 Arabidopsis thaliana
AT1G48605 2.0kb downstream 2.0kb downstream 2888 true Chr1: 17967395-17970282 Arabidopsis thaliana
AT1G48605 2.0kb downstream 2.0kb downstream 2000 false Chr1: 17967395-17969394 Arabidopsis thaliana
AT1G48605 5.0kb upstream 5.0kb upstream 5888 true Chr1: 17969395-17975282 Arabidopsis thaliana
AT1G48605 5.0kb upstream 5.0kb upstream 5000 false Chr1: 17970283-17975282 Arabidopsis thaliana
AT1G48605 5.0kb downstream 5.0kb downstream 5888 true Chr1: 17964395-17970282 Arabidopsis thaliana
AT1G48605 5.0kb downstream 5.0kb downstream 5000 false Chr1: 17964395-17969394 Arabidopsis thaliana
AT1G48605 10.0kb upstream 10.0kb upstream 10888 true Chr1: 17969395-17980282 Arabidopsis thaliana
AT1G48605 10.0kb upstream 10.0kb upstream 10000 false Chr1: 17970283-17980282 Arabidopsis thaliana
AT1G48605 10.0kb downstream 10.0kb downstream 10888 true Chr1: 17959395-17970282 Arabidopsis thaliana
AT1G48605 10.0kb downstream 10.0kb downstream 10000 false Chr1: 17959395-17969394 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343260 5261 Brassicaceae View MSA
123783511 5264 Brassicales-Malvales View MSA
124281740 5266 SBM View MSA
124136448 5268 Malvidae View MSA
123864307 5270 Rosid View MSA
123739959 5271 Pentapetalae View MSA
122787988 5272 Eudicot View MSA
122043934 5273 Angiosperm View MSA
121347279 5274 Embryophyte View MSA
123427433 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.437        
cufflinks 7.549        
cufflinks 3.806       Low
cufflinks 9.054       High
cufflinks 6.439        
cufflinks 4.444        

0 Strain