Gene : HON5 A. thaliana TAIR10
Primary Identifier:  ? AT1G48620 Defline:  (1 of 2) PTHR11467//PTHR11467:SF33 - HISTONE H1/H5 // SUBFAMILY NOT NAMED
Genomic Order:  3891 Name:  ? AT1G48620
Secondary Identifier:  ? PAC:19653485
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G48620 0.5kb upstream 0.5kb upstream 3193 true Chr1: 17973697-17976889 Arabidopsis thaliana
AT1G48620 0.5kb upstream 0.5kb upstream 500 false Chr1: 17976390-17976889 Arabidopsis thaliana
AT1G48620 0.5kb downstream 0.5kb downstream 3193 true Chr1: 17973197-17976389 Arabidopsis thaliana
AT1G48620 0.5kb downstream 0.5kb downstream 500 false Chr1: 17973197-17973696 Arabidopsis thaliana
AT1G48620 1.0kb upstream 1.0kb upstream 3693 true Chr1: 17973697-17977389 Arabidopsis thaliana
AT1G48620 1.0kb upstream 1.0kb upstream 1000 false Chr1: 17976390-17977389 Arabidopsis thaliana
AT1G48620 1.0kb downstream 1.0kb downstream 3693 true Chr1: 17972697-17976389 Arabidopsis thaliana
AT1G48620 1.0kb downstream 1.0kb downstream 1000 false Chr1: 17972697-17973696 Arabidopsis thaliana
AT1G48620 2.0kb upstream 2.0kb upstream 4693 true Chr1: 17973697-17978389 Arabidopsis thaliana
AT1G48620 2.0kb upstream 2.0kb upstream 2000 false Chr1: 17976390-17978389 Arabidopsis thaliana
AT1G48620 2.0kb downstream 2.0kb downstream 4693 true Chr1: 17971697-17976389 Arabidopsis thaliana
AT1G48620 2.0kb downstream 2.0kb downstream 2000 false Chr1: 17971697-17973696 Arabidopsis thaliana
AT1G48620 5.0kb upstream 5.0kb upstream 7693 true Chr1: 17973697-17981389 Arabidopsis thaliana
AT1G48620 5.0kb upstream 5.0kb upstream 5000 false Chr1: 17976390-17981389 Arabidopsis thaliana
AT1G48620 5.0kb downstream 5.0kb downstream 7693 true Chr1: 17968697-17976389 Arabidopsis thaliana
AT1G48620 5.0kb downstream 5.0kb downstream 5000 false Chr1: 17968697-17973696 Arabidopsis thaliana
AT1G48620 10.0kb upstream 10.0kb upstream 12693 true Chr1: 17973697-17986389 Arabidopsis thaliana
AT1G48620 10.0kb upstream 10.0kb upstream 10000 false Chr1: 17976390-17986389 Arabidopsis thaliana
AT1G48620 10.0kb downstream 10.0kb downstream 12693 true Chr1: 17963697-17976389 Arabidopsis thaliana
AT1G48620 10.0kb downstream 10.0kb downstream 10000 false Chr1: 17963697-17973696 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029847 5273 Angiosperm View MSA
122374716 5261 Brassicaceae View MSA
123839961 5264 Brassicales-Malvales View MSA
124349983 5266 SBM View MSA
124239615 5268 Malvidae View MSA
124072577 5270 Rosid View MSA
123747528 5271 Pentapetalae View MSA
122795088 5272 Eudicot View MSA
121350617 5274 Embryophyte View MSA
123428771 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.277        
cufflinks 32.752     High  
cufflinks 17.66        
cufflinks 33.17     High High
cufflinks 17.927        
cufflinks 29.788     High  

0 Strain