Gene : AT1G48350 A. thaliana TAIR10
Defline:  (1 of 3) K02881 - large subunit ribosomal protein L18 (RP-L18, MRPL18, rplR) Genomic Order:  3861
Name:  ? AT1G48350 Secondary Identifier:  ? PAC:19654218
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G48350 0.5kb upstream 0.5kb upstream 1639 true Chr1: 17866704-17868342 Arabidopsis thaliana
AT1G48350 0.5kb upstream 0.5kb upstream 500 false Chr1: 17866704-17867203 Arabidopsis thaliana
AT1G48350 0.5kb downstream 0.5kb downstream 1639 true Chr1: 17867204-17868842 Arabidopsis thaliana
AT1G48350 0.5kb downstream 0.5kb downstream 500 false Chr1: 17868343-17868842 Arabidopsis thaliana
AT1G48350 1.0kb upstream 1.0kb upstream 2139 true Chr1: 17866204-17868342 Arabidopsis thaliana
AT1G48350 1.0kb upstream 1.0kb upstream 1000 false Chr1: 17866204-17867203 Arabidopsis thaliana
AT1G48350 1.0kb downstream 1.0kb downstream 2139 true Chr1: 17867204-17869342 Arabidopsis thaliana
AT1G48350 1.0kb downstream 1.0kb downstream 1000 false Chr1: 17868343-17869342 Arabidopsis thaliana
AT1G48350 2.0kb upstream 2.0kb upstream 3139 true Chr1: 17865204-17868342 Arabidopsis thaliana
AT1G48350 2.0kb upstream 2.0kb upstream 2000 false Chr1: 17865204-17867203 Arabidopsis thaliana
AT1G48350 2.0kb downstream 2.0kb downstream 3139 true Chr1: 17867204-17870342 Arabidopsis thaliana
AT1G48350 2.0kb downstream 2.0kb downstream 2000 false Chr1: 17868343-17870342 Arabidopsis thaliana
AT1G48350 5.0kb upstream 5.0kb upstream 6139 true Chr1: 17862204-17868342 Arabidopsis thaliana
AT1G48350 5.0kb upstream 5.0kb upstream 5000 false Chr1: 17862204-17867203 Arabidopsis thaliana
AT1G48350 5.0kb downstream 5.0kb downstream 6139 true Chr1: 17867204-17873342 Arabidopsis thaliana
AT1G48350 5.0kb downstream 5.0kb downstream 5000 false Chr1: 17868343-17873342 Arabidopsis thaliana
AT1G48350 10.0kb upstream 10.0kb upstream 11139 true Chr1: 17857204-17868342 Arabidopsis thaliana
AT1G48350 10.0kb upstream 10.0kb upstream 10000 false Chr1: 17857204-17867203 Arabidopsis thaliana
AT1G48350 10.0kb downstream 10.0kb downstream 11139 true Chr1: 17867204-17878342 Arabidopsis thaliana
AT1G48350 10.0kb downstream 10.0kb downstream 10000 false Chr1: 17868343-17878342 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362132 5261 Brassicaceae View MSA
123830079 5264 Brassicales-Malvales View MSA
124344652 5266 SBM View MSA
124239065 5268 Malvidae View MSA
124064219 5270 Rosid View MSA
123746158 5271 Pentapetalae View MSA
122789168 5272 Eudicot View MSA
122046996 5273 Angiosperm View MSA
121350781 5274 Embryophyte View MSA
123423914 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 211.646     High  
cufflinks 20.925        
cufflinks 256.353     High High
cufflinks 19.893        
cufflinks 197.482     High  
cufflinks 19.028        

0 Strain