Gene : AT1G48430 A. thaliana TAIR10
Defline:  (1 of 2) 4.6.1.15 - FAD-AMP lyase (cyclizing) / FMN cyclase Genomic Order:  3870
Name:  ? AT1G48430 Secondary Identifier:  ? PAC:19651792
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY66-373 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G48430 0.5kb upstream 0.5kb upstream 4671 true Chr1: 17902636-17907306 Arabidopsis thaliana
AT1G48430 0.5kb upstream 0.5kb upstream 500 false Chr1: 17906807-17907306 Arabidopsis thaliana
AT1G48430 0.5kb downstream 0.5kb downstream 4671 true Chr1: 17902136-17906806 Arabidopsis thaliana
AT1G48430 0.5kb downstream 0.5kb downstream 500 false Chr1: 17902136-17902635 Arabidopsis thaliana
AT1G48430 1.0kb upstream 1.0kb upstream 5171 true Chr1: 17902636-17907806 Arabidopsis thaliana
AT1G48430 1.0kb upstream 1.0kb upstream 1000 false Chr1: 17906807-17907806 Arabidopsis thaliana
AT1G48430 1.0kb downstream 1.0kb downstream 5171 true Chr1: 17901636-17906806 Arabidopsis thaliana
AT1G48430 1.0kb downstream 1.0kb downstream 1000 false Chr1: 17901636-17902635 Arabidopsis thaliana
AT1G48430 2.0kb upstream 2.0kb upstream 6171 true Chr1: 17902636-17908806 Arabidopsis thaliana
AT1G48430 2.0kb upstream 2.0kb upstream 2000 false Chr1: 17906807-17908806 Arabidopsis thaliana
AT1G48430 2.0kb downstream 2.0kb downstream 6171 true Chr1: 17900636-17906806 Arabidopsis thaliana
AT1G48430 2.0kb downstream 2.0kb downstream 2000 false Chr1: 17900636-17902635 Arabidopsis thaliana
AT1G48430 5.0kb upstream 5.0kb upstream 9171 true Chr1: 17902636-17911806 Arabidopsis thaliana
AT1G48430 5.0kb upstream 5.0kb upstream 5000 false Chr1: 17906807-17911806 Arabidopsis thaliana
AT1G48430 5.0kb downstream 5.0kb downstream 9171 true Chr1: 17897636-17906806 Arabidopsis thaliana
AT1G48430 5.0kb downstream 5.0kb downstream 5000 false Chr1: 17897636-17902635 Arabidopsis thaliana
AT1G48430 10.0kb upstream 10.0kb upstream 14171 true Chr1: 17902636-17916806 Arabidopsis thaliana
AT1G48430 10.0kb upstream 10.0kb upstream 10000 false Chr1: 17906807-17916806 Arabidopsis thaliana
AT1G48430 10.0kb downstream 10.0kb downstream 14171 true Chr1: 17892636-17906806 Arabidopsis thaliana
AT1G48430 10.0kb downstream 10.0kb downstream 10000 false Chr1: 17892636-17902635 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361852 5261 Brassicaceae View MSA
123837917 5264 Brassicales-Malvales View MSA
124337748 5266 SBM View MSA
124241079 5268 Malvidae View MSA
124068407 5270 Rosid View MSA
123740080 5271 Pentapetalae View MSA
122789657 5272 Eudicot View MSA
122043342 5273 Angiosperm View MSA
121346732 5274 Embryophyte View MSA
123424504 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.375        
cufflinks 17.872       High
cufflinks 14.043        
cufflinks 16.969        
cufflinks 15.051        
cufflinks 12.602       Low

0 Strain