Gene : ATE2F2 A. thaliana TAIR10
Primary Identifier:  ? AT1G47870 Defline:  (1 of 1) PTHR12081//PTHR12081:SF51 - TRANSCRIPTION FACTOR E2F // TRANSCRIPTION FACTOR E2FC
Genomic Order:  3813 Name:  ? AT1G47870
Secondary Identifier:  ? PAC:19653831
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Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G47870 0.5kb upstream 0.5kb upstream 3516 true Chr1: 17634257-17637772 Arabidopsis thaliana
AT1G47870 0.5kb upstream 0.5kb upstream 500 false Chr1: 17634257-17634756 Arabidopsis thaliana
AT1G47870 0.5kb downstream 0.5kb downstream 3516 true Chr1: 17634757-17638272 Arabidopsis thaliana
AT1G47870 0.5kb downstream 0.5kb downstream 500 false Chr1: 17637773-17638272 Arabidopsis thaliana
AT1G47870 1.0kb upstream 1.0kb upstream 4016 true Chr1: 17633757-17637772 Arabidopsis thaliana
AT1G47870 1.0kb upstream 1.0kb upstream 1000 false Chr1: 17633757-17634756 Arabidopsis thaliana
AT1G47870 1.0kb downstream 1.0kb downstream 4016 true Chr1: 17634757-17638772 Arabidopsis thaliana
AT1G47870 1.0kb downstream 1.0kb downstream 1000 false Chr1: 17637773-17638772 Arabidopsis thaliana
AT1G47870 2.0kb upstream 2.0kb upstream 5016 true Chr1: 17632757-17637772 Arabidopsis thaliana
AT1G47870 2.0kb upstream 2.0kb upstream 2000 false Chr1: 17632757-17634756 Arabidopsis thaliana
AT1G47870 2.0kb downstream 2.0kb downstream 5016 true Chr1: 17634757-17639772 Arabidopsis thaliana
AT1G47870 2.0kb downstream 2.0kb downstream 2000 false Chr1: 17637773-17639772 Arabidopsis thaliana
AT1G47870 5.0kb upstream 5.0kb upstream 8016 true Chr1: 17629757-17637772 Arabidopsis thaliana
AT1G47870 5.0kb upstream 5.0kb upstream 5000 false Chr1: 17629757-17634756 Arabidopsis thaliana
AT1G47870 5.0kb downstream 5.0kb downstream 8016 true Chr1: 17634757-17642772 Arabidopsis thaliana
AT1G47870 5.0kb downstream 5.0kb downstream 5000 false Chr1: 17637773-17642772 Arabidopsis thaliana
AT1G47870 10.0kb upstream 10.0kb upstream 13016 true Chr1: 17624757-17637772 Arabidopsis thaliana
AT1G47870 10.0kb upstream 10.0kb upstream 10000 false Chr1: 17624757-17634756 Arabidopsis thaliana
AT1G47870 10.0kb downstream 10.0kb downstream 13016 true Chr1: 17634757-17647772 Arabidopsis thaliana
AT1G47870 10.0kb downstream 10.0kb downstream 10000 false Chr1: 17637773-17647772 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792207 5273 Angiosperm View MSA
122371181 5261 Brassicaceae View MSA
123827990 5264 Brassicales-Malvales View MSA
124337351 5266 SBM View MSA
124241947 5268 Malvidae View MSA
124061286 5270 Rosid View MSA
123738589 5271 Pentapetalae View MSA
122796961 5272 Eudicot View MSA
121063453 5274 Embryophyte View MSA
123428750 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.722        
cufflinks 2.593        
cufflinks 1.465       Low
cufflinks 2.545        
cufflinks 1.386       Low
cufflinks 2.677        

0 Strain