Gene : 3BETAHSD/D1 A. thaliana TAIR10
Primary Identifier:  ? AT1G47290 Defline:  (1 of 3) K07748 - sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating) (E1.1.1.170, NSDHL, ERG26)
Genomic Order:  3754 Name:  ? AT1G47290
Secondary Identifier:  ? PAC:19650634
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G47290 0.5kb upstream 0.5kb upstream 3925 true Chr1: 17335349-17339273 Arabidopsis thaliana
AT1G47290 0.5kb upstream 0.5kb upstream 500 false Chr1: 17335349-17335848 Arabidopsis thaliana
AT1G47290 0.5kb downstream 0.5kb downstream 3925 true Chr1: 17335849-17339773 Arabidopsis thaliana
AT1G47290 0.5kb downstream 0.5kb downstream 500 false Chr1: 17339274-17339773 Arabidopsis thaliana
AT1G47290 1.0kb upstream 1.0kb upstream 4425 true Chr1: 17334849-17339273 Arabidopsis thaliana
AT1G47290 1.0kb upstream 1.0kb upstream 1000 false Chr1: 17334849-17335848 Arabidopsis thaliana
AT1G47290 1.0kb downstream 1.0kb downstream 4425 true Chr1: 17335849-17340273 Arabidopsis thaliana
AT1G47290 1.0kb downstream 1.0kb downstream 1000 false Chr1: 17339274-17340273 Arabidopsis thaliana
AT1G47290 2.0kb upstream 2.0kb upstream 5425 true Chr1: 17333849-17339273 Arabidopsis thaliana
AT1G47290 2.0kb upstream 2.0kb upstream 2000 false Chr1: 17333849-17335848 Arabidopsis thaliana
AT1G47290 2.0kb downstream 2.0kb downstream 5425 true Chr1: 17335849-17341273 Arabidopsis thaliana
AT1G47290 2.0kb downstream 2.0kb downstream 2000 false Chr1: 17339274-17341273 Arabidopsis thaliana
AT1G47290 5.0kb upstream 5.0kb upstream 8425 true Chr1: 17330849-17339273 Arabidopsis thaliana
AT1G47290 5.0kb upstream 5.0kb upstream 5000 false Chr1: 17330849-17335848 Arabidopsis thaliana
AT1G47290 5.0kb downstream 5.0kb downstream 8425 true Chr1: 17335849-17344273 Arabidopsis thaliana
AT1G47290 5.0kb downstream 5.0kb downstream 5000 false Chr1: 17339274-17344273 Arabidopsis thaliana
AT1G47290 10.0kb upstream 10.0kb upstream 13425 true Chr1: 17325849-17339273 Arabidopsis thaliana
AT1G47290 10.0kb upstream 10.0kb upstream 10000 false Chr1: 17325849-17335848 Arabidopsis thaliana
AT1G47290 10.0kb downstream 10.0kb downstream 13425 true Chr1: 17335849-17349273 Arabidopsis thaliana
AT1G47290 10.0kb downstream 10.0kb downstream 10000 false Chr1: 17339274-17349273 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365122 5261 Brassicaceae View MSA
123798895 5264 Brassicales-Malvales View MSA
124296471 5266 SBM View MSA
124148612 5268 Malvidae View MSA
123874575 5270 Rosid View MSA
123743534 5271 Pentapetalae View MSA
122791319 5272 Eudicot View MSA
122044485 5273 Angiosperm View MSA
121347416 5274 Embryophyte View MSA
123427810 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.598        
cufflinks 4.26        
cufflinks 2.12       Low
cufflinks 4.702        
cufflinks 2.081       Low
cufflinks 4.901       High

0 Strain