Gene : RD21A A. thaliana TAIR10
Primary Identifier:  ? AT1G47128 Defline:  (1 of 4) PTHR12411:SF344 - CYSTEINE PROTEASE COMPONENT OF PROTEASE-INHIBITOR COMPLEX-RELATED
Genomic Order:  3741 Name:  ? AT1G47128
Secondary Identifier:  ? PAC:19653381
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G47128 0.5kb upstream 0.5kb upstream 3346 true Chr1: 17282825-17286170 Arabidopsis thaliana
AT1G47128 0.5kb upstream 0.5kb upstream 500 false Chr1: 17285671-17286170 Arabidopsis thaliana
AT1G47128 0.5kb downstream 0.5kb downstream 3346 true Chr1: 17282325-17285670 Arabidopsis thaliana
AT1G47128 0.5kb downstream 0.5kb downstream 500 false Chr1: 17282325-17282824 Arabidopsis thaliana
AT1G47128 1.0kb upstream 1.0kb upstream 3846 true Chr1: 17282825-17286670 Arabidopsis thaliana
AT1G47128 1.0kb upstream 1.0kb upstream 1000 false Chr1: 17285671-17286670 Arabidopsis thaliana
AT1G47128 1.0kb downstream 1.0kb downstream 3846 true Chr1: 17281825-17285670 Arabidopsis thaliana
AT1G47128 1.0kb downstream 1.0kb downstream 1000 false Chr1: 17281825-17282824 Arabidopsis thaliana
AT1G47128 2.0kb upstream 2.0kb upstream 4846 true Chr1: 17282825-17287670 Arabidopsis thaliana
AT1G47128 2.0kb upstream 2.0kb upstream 2000 false Chr1: 17285671-17287670 Arabidopsis thaliana
AT1G47128 2.0kb downstream 2.0kb downstream 4846 true Chr1: 17280825-17285670 Arabidopsis thaliana
AT1G47128 2.0kb downstream 2.0kb downstream 2000 false Chr1: 17280825-17282824 Arabidopsis thaliana
AT1G47128 5.0kb upstream 5.0kb upstream 7846 true Chr1: 17282825-17290670 Arabidopsis thaliana
AT1G47128 5.0kb upstream 5.0kb upstream 5000 false Chr1: 17285671-17290670 Arabidopsis thaliana
AT1G47128 5.0kb downstream 5.0kb downstream 7846 true Chr1: 17277825-17285670 Arabidopsis thaliana
AT1G47128 5.0kb downstream 5.0kb downstream 5000 false Chr1: 17277825-17282824 Arabidopsis thaliana
AT1G47128 10.0kb upstream 10.0kb upstream 12846 true Chr1: 17282825-17295670 Arabidopsis thaliana
AT1G47128 10.0kb upstream 10.0kb upstream 10000 false Chr1: 17285671-17295670 Arabidopsis thaliana
AT1G47128 10.0kb downstream 10.0kb downstream 12846 true Chr1: 17272825-17285670 Arabidopsis thaliana
AT1G47128 10.0kb downstream 10.0kb downstream 10000 false Chr1: 17272825-17282824 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361515 5261 Brassicaceae View MSA
123831665 5264 Brassicales-Malvales View MSA
124340897 5266 SBM View MSA
124247983 5268 Malvidae View MSA
124071516 5270 Rosid View MSA
123751389 5271 Pentapetalae View MSA
122796567 5272 Eudicot View MSA
122043914 5273 Angiosperm View MSA
123428950 5275 Viridiplantae View MSA
121348634 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 238.648     High High
cufflinks 123.834     High  
cufflinks 165.846     High  
cufflinks 155.86     High  
cufflinks 200.038     High  
cufflinks 110.271     High Low

0 Strain