Gene : AT1G47330 A. thaliana TAIR10
Defline:  (1 of 1) PTHR12064//PTHR12064:SF35 - ANCIENT CONSERVED DOMAIN PROTEIN-RELATED // SUBFAMILY NOT NAMED Genomic Order:  3758
Name:  ? AT1G47330 Secondary Identifier:  ? PAC:19655369
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G47330 0.5kb upstream 0.5kb upstream 3326 true Chr1: 17350550-17353875 Arabidopsis thaliana
AT1G47330 0.5kb upstream 0.5kb upstream 500 false Chr1: 17350550-17351049 Arabidopsis thaliana
AT1G47330 0.5kb downstream 0.5kb downstream 3326 true Chr1: 17351050-17354375 Arabidopsis thaliana
AT1G47330 0.5kb downstream 0.5kb downstream 500 false Chr1: 17353876-17354375 Arabidopsis thaliana
AT1G47330 1.0kb upstream 1.0kb upstream 3826 true Chr1: 17350050-17353875 Arabidopsis thaliana
AT1G47330 1.0kb upstream 1.0kb upstream 1000 false Chr1: 17350050-17351049 Arabidopsis thaliana
AT1G47330 1.0kb downstream 1.0kb downstream 3826 true Chr1: 17351050-17354875 Arabidopsis thaliana
AT1G47330 1.0kb downstream 1.0kb downstream 1000 false Chr1: 17353876-17354875 Arabidopsis thaliana
AT1G47330 2.0kb upstream 2.0kb upstream 4826 true Chr1: 17349050-17353875 Arabidopsis thaliana
AT1G47330 2.0kb upstream 2.0kb upstream 2000 false Chr1: 17349050-17351049 Arabidopsis thaliana
AT1G47330 2.0kb downstream 2.0kb downstream 4826 true Chr1: 17351050-17355875 Arabidopsis thaliana
AT1G47330 2.0kb downstream 2.0kb downstream 2000 false Chr1: 17353876-17355875 Arabidopsis thaliana
AT1G47330 5.0kb upstream 5.0kb upstream 7826 true Chr1: 17346050-17353875 Arabidopsis thaliana
AT1G47330 5.0kb upstream 5.0kb upstream 5000 false Chr1: 17346050-17351049 Arabidopsis thaliana
AT1G47330 5.0kb downstream 5.0kb downstream 7826 true Chr1: 17351050-17358875 Arabidopsis thaliana
AT1G47330 5.0kb downstream 5.0kb downstream 5000 false Chr1: 17353876-17358875 Arabidopsis thaliana
AT1G47330 10.0kb upstream 10.0kb upstream 12826 true Chr1: 17341050-17353875 Arabidopsis thaliana
AT1G47330 10.0kb upstream 10.0kb upstream 10000 false Chr1: 17341050-17351049 Arabidopsis thaliana
AT1G47330 10.0kb downstream 10.0kb downstream 12826 true Chr1: 17351050-17363875 Arabidopsis thaliana
AT1G47330 10.0kb downstream 10.0kb downstream 10000 false Chr1: 17353876-17363875 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368009 5261 Brassicaceae View MSA
123837638 5264 Brassicales-Malvales View MSA
124342723 5266 SBM View MSA
124249676 5268 Malvidae View MSA
124067520 5270 Rosid View MSA
123745826 5271 Pentapetalae View MSA
122787800 5272 Eudicot View MSA
122046250 5273 Angiosperm View MSA
121348237 5274 Embryophyte View MSA
123426941 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.984        
cufflinks 16.128       High
cufflinks 7.482       Low
cufflinks 15.655       High
cufflinks 8.466        
cufflinks 12.004        

0 Strain