Gene : AT1G45207 A. thaliana TAIR10
Defline:  (1 of 1) PTHR31471:SF13 - REMORIN-LIKE PROTEIN Genomic Order:  3713
Name:  ? AT1G45207 Secondary Identifier:  ? PAC:19649125
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G45207 0.5kb upstream 0.5kb upstream 3698 true Chr1: 17130351-17134048 Arabidopsis thaliana
AT1G45207 0.5kb upstream 0.5kb upstream 500 false Chr1: 17133549-17134048 Arabidopsis thaliana
AT1G45207 0.5kb downstream 0.5kb downstream 3698 true Chr1: 17129851-17133548 Arabidopsis thaliana
AT1G45207 0.5kb downstream 0.5kb downstream 500 false Chr1: 17129851-17130350 Arabidopsis thaliana
AT1G45207 1.0kb upstream 1.0kb upstream 4198 true Chr1: 17130351-17134548 Arabidopsis thaliana
AT1G45207 1.0kb upstream 1.0kb upstream 1000 false Chr1: 17133549-17134548 Arabidopsis thaliana
AT1G45207 1.0kb downstream 1.0kb downstream 4198 true Chr1: 17129351-17133548 Arabidopsis thaliana
AT1G45207 1.0kb downstream 1.0kb downstream 1000 false Chr1: 17129351-17130350 Arabidopsis thaliana
AT1G45207 2.0kb upstream 2.0kb upstream 5198 true Chr1: 17130351-17135548 Arabidopsis thaliana
AT1G45207 2.0kb upstream 2.0kb upstream 2000 false Chr1: 17133549-17135548 Arabidopsis thaliana
AT1G45207 2.0kb downstream 2.0kb downstream 5198 true Chr1: 17128351-17133548 Arabidopsis thaliana
AT1G45207 2.0kb downstream 2.0kb downstream 2000 false Chr1: 17128351-17130350 Arabidopsis thaliana
AT1G45207 5.0kb upstream 5.0kb upstream 8198 true Chr1: 17130351-17138548 Arabidopsis thaliana
AT1G45207 5.0kb upstream 5.0kb upstream 5000 false Chr1: 17133549-17138548 Arabidopsis thaliana
AT1G45207 5.0kb downstream 5.0kb downstream 8198 true Chr1: 17125351-17133548 Arabidopsis thaliana
AT1G45207 5.0kb downstream 5.0kb downstream 5000 false Chr1: 17125351-17130350 Arabidopsis thaliana
AT1G45207 10.0kb upstream 10.0kb upstream 13198 true Chr1: 17130351-17143548 Arabidopsis thaliana
AT1G45207 10.0kb upstream 10.0kb upstream 10000 false Chr1: 17133549-17143548 Arabidopsis thaliana
AT1G45207 10.0kb downstream 10.0kb downstream 13198 true Chr1: 17120351-17133548 Arabidopsis thaliana
AT1G45207 10.0kb downstream 10.0kb downstream 10000 false Chr1: 17120351-17130350 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375179 5261 Brassicaceae View MSA
123827736 5264 Brassicales-Malvales View MSA
124345041 5266 SBM View MSA
124244218 5268 Malvidae View MSA
124060988 5270 Rosid View MSA
123736964 5271 Pentapetalae View MSA
122788463 5272 Eudicot View MSA
122043924 5273 Angiosperm View MSA
121348920 5274 Embryophyte View MSA
123381079 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.869        
cufflinks 22.109        
cufflinks 4.41        
cufflinks 16.681        
cufflinks 4.036       Low
cufflinks 24.084       High

0 Strain