Gene : AT1G44835 A. thaliana TAIR10
Defline:  (1 of 1) PTHR31423//PTHR31423:SF3 - FAMILY NOT NAMED // PROLYL-TRNA SYNTHETASE ASSOCIATED DOMAIN-CONTAINING PROTEIN 1-RELATED Genomic Order:  3684
Name:  ? AT1G44835 Secondary Identifier:  ? PAC:19654486
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana TRNA-CHARGING-PWY Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G44835 0.5kb upstream 0.5kb upstream 3228 true Chr1: 16939297-16942524 Arabidopsis thaliana
AT1G44835 0.5kb upstream 0.5kb upstream 500 false Chr1: 16939297-16939796 Arabidopsis thaliana
AT1G44835 0.5kb downstream 0.5kb downstream 3228 true Chr1: 16939797-16943024 Arabidopsis thaliana
AT1G44835 0.5kb downstream 0.5kb downstream 500 false Chr1: 16942525-16943024 Arabidopsis thaliana
AT1G44835 1.0kb upstream 1.0kb upstream 3728 true Chr1: 16938797-16942524 Arabidopsis thaliana
AT1G44835 1.0kb upstream 1.0kb upstream 1000 false Chr1: 16938797-16939796 Arabidopsis thaliana
AT1G44835 1.0kb downstream 1.0kb downstream 3728 true Chr1: 16939797-16943524 Arabidopsis thaliana
AT1G44835 1.0kb downstream 1.0kb downstream 1000 false Chr1: 16942525-16943524 Arabidopsis thaliana
AT1G44835 2.0kb upstream 2.0kb upstream 4728 true Chr1: 16937797-16942524 Arabidopsis thaliana
AT1G44835 2.0kb upstream 2.0kb upstream 2000 false Chr1: 16937797-16939796 Arabidopsis thaliana
AT1G44835 2.0kb downstream 2.0kb downstream 4728 true Chr1: 16939797-16944524 Arabidopsis thaliana
AT1G44835 2.0kb downstream 2.0kb downstream 2000 false Chr1: 16942525-16944524 Arabidopsis thaliana
AT1G44835 5.0kb upstream 5.0kb upstream 7728 true Chr1: 16934797-16942524 Arabidopsis thaliana
AT1G44835 5.0kb upstream 5.0kb upstream 5000 false Chr1: 16934797-16939796 Arabidopsis thaliana
AT1G44835 5.0kb downstream 5.0kb downstream 7728 true Chr1: 16939797-16947524 Arabidopsis thaliana
AT1G44835 5.0kb downstream 5.0kb downstream 5000 false Chr1: 16942525-16947524 Arabidopsis thaliana
AT1G44835 10.0kb upstream 10.0kb upstream 12728 true Chr1: 16929797-16942524 Arabidopsis thaliana
AT1G44835 10.0kb upstream 10.0kb upstream 10000 false Chr1: 16929797-16939796 Arabidopsis thaliana
AT1G44835 10.0kb downstream 10.0kb downstream 12728 true Chr1: 16939797-16952524 Arabidopsis thaliana
AT1G44835 10.0kb downstream 10.0kb downstream 10000 false Chr1: 16942525-16952524 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367335 5261 Brassicaceae View MSA
123836180 5264 Brassicales-Malvales View MSA
124337596 5266 SBM View MSA
124237844 5268 Malvidae View MSA
124062922 5270 Rosid View MSA
123736377 5271 Pentapetalae View MSA
122789736 5272 Eudicot View MSA
122045268 5273 Angiosperm View MSA
121348045 5274 Embryophyte View MSA
123425543 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.99        
cufflinks 3.557        
cufflinks 2.574        
cufflinks 4.024        
cufflinks 2.323       Low
cufflinks 4.822       High

0 Strain